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Efficient decoding algorithms for generalized hidden Markov model gene finders

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Europe PubMed Central

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Efficient decoding algorithms for generalized hidden Markov model gene finders (English)

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Steven L Salzberg

4

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Mihaela Pertea

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2

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Mihaela Pertea

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Arthur L. Delcher

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3

object named as

Arthur L Delcher

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author name string

William H Majoros

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1

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language of work or name

English

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publication date

2005

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published in

BMC Bioinformatics

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volume

6

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issue

1

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page(s)

16

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exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-6-16

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cites work

Gene finding in novel genomes

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PubMed Central

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7 April 2017

Prediction of complete gene structures in human genomic DNA

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PubMed Central

reference URL

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7 April 2017

Gene prediction with a hidden Markov model and a new intron submodel

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7 April 2017

SLAM: cross-species gene finding and alignment with a generalized pair hidden Markov model

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=552317

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28 September 2017

Interpolated Markov models for eukaryotic gene finding.

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28 September 2017

A generalized hidden Markov model for the recognition of human genes in DNA.

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PubMed Central

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30 May 2018

Efficient implementation of a generalized pair hidden Markov model for comparative gene finding.

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28 November 2018

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

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28 November 2018

Applications of Generalized Pair Hidden Markov Models to Alignment and Gene Finding Problems

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PubMed Central

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28 November 2018

Phat--a gene finding program for Plasmodium falciparum.

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PubMed Central

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retrieved

28 November 2018

Identifiers

DOI

10.1186/1471-2105-6-16

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DBLP publication ID

journals/bmcbi/MajorosPDS05

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DBLP Dataset 2021-01-02

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28 January 2021

Dimensions Publication ID

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ResearchGate publication ID

8063387

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(Q24797973)

Efficient decoding algorithms for generalized hidden Markov model gene finders

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