(Q24801708)

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Comparative mitochondrial genomics in zygomycetes: bacteria-like RNase P RNAs, mobile elements and a close source of the group I intron invasion in angiosperms

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scholarly article

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Comparative mitochondrial genomics in zygomycetes: bacteria-like RNase P RNAs, mobile elements and a close source of the group I intron invasion in angiosperms (English)

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Bernd Franz Lang

6

object named as

B Franz Lang

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author name string

Elias Seif

1

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Jessica Leigh

2

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Yu Liu

3

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Ingeborg Roewer

4

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Lise Forget

5

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language of work or name

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publication date

2005

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Nucleic Acids Research

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33

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2

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734-44

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MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

The Ribonuclease P Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

Mitochondrial Genome Evolution and the Origin of Eukaryotes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

1 reference

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7 April 2017

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

CONSEL: for assessing the confidence of phylogenetic tree selection

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

7 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

28 September 2017

Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

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Mitochondrial RNase P RNAs in ascomycete fungi: lineage-specific variations in RNA secondary structure

1 reference

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28 September 2017

Evolution of monoblepharidalean fungi based on complete mitochondrial genome sequences

1 reference

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A comparison of three fission yeast mitochondrial genomes

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1 reference

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Molecular phylogeny of parasitic zygomycota (Dimargaritales, zoopagales) based on nuclear small subunit ribosomal DNA sequences

1 reference

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28 September 2017

Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates

1 reference

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28 September 2017

Phylogeny and PCR identification of clinically important Zygomycetes based on nuclear ribosomal-DNA sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

28 September 2017

Explosive invasion of plant mitochondria by a group I intron

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

28 September 2017

The RNase P RNA from cyanobacteria: short tandemly repeated repetitive (STRR) sequences are present within the RNase P RNA gene in heterocyst-forming cyanobacteria.

1 reference

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28 September 2017

Interspecific transfer of mitochondrial genes in fungi and creation of a homologous hybrid gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

28 September 2017

Artificial mobile DNA element constructed from the EcoRI endonuclease gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

28 September 2017

The complete mitochondrial DNA sequences of Nephroselmis olivacea and Pedinomonas minor. Two radically different evolutionary patterns within green algae

1 reference

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30 May 2018

The Peperomia mitochondrial coxI group I intron: timing of horizontal transfer and subsequent evolution of the intron

1 reference

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30 May 2018

Fungal origin by horizontal transfer of a plant mitochondrial group I intron in the chimeric CoxI gene of Peperomia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

30 May 2018

The mitochondrial URF1 gene in Neurospora crassa has an intron that contains a novel type of URF.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

30 May 2018

Dramatic size variation of yeast mitochondrial RNAs suggests that RNase P RNAs can be quite small

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548346

30 May 2018

IQPNNI: moving fast through tree space and stopping in time.

1 reference

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Hyaloraphidium curvatum is not a green alga, but a lower fungus; Amoebidium parasiticum is not a fungus, but a member of the DRIPs

1 reference

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Double-hairpin elements in the mitochondrial DNA of allomyces: evidence for mobility

1 reference

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28 November 2018

An ancestral mitochondrial DNA resembling a eubacterial genome in miniature

1 reference

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28 November 2018

Mycoplasma fermentans simplifies our view of the catalytic core of ribonuclease P RNA.

1 reference

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Rapid isolation of nuclei from carrot suspension culture cells using a BioNebulizer.

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Reliable amplification of actin genes facilitates deep-level phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/15689432

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel motif for identifying rps3 homologs in fungal mitochondrial genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15689432

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal DNA and resolution of branching order among the ascomycota: how many nucleotides are enough?

1 reference

https://pubmed.ncbi.nlm.nih.gov/15689432

12 December 2020

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inferred from PubMed ID database lookup

Analysis of class I introns in a mitochondrial plasmid associated with senescence of Podospora anserina reveals extraordinary resemblance to the Tetrahymena ribosomal intron

1 reference

https://pubmed.ncbi.nlm.nih.gov/15689432

12 December 2020

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inferred from PubMed ID database lookup

The fungal mitochondrial genome project: evolution of fungal mitochondrial genomes and their gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/15689432

12 December 2020

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inferred from PubMed ID database lookup

Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15689432

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKI199

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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