(Q24809633)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

title

Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

0 references

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

8

Jonas S Almeida

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

author name string

Yian A Chen

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

David J McKillen

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

Shuyuan Wu

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

Robert Chapman

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

Paul S Gross

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

Gregory W Warr

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

language of work or name

English

0 references

publication date

7 December 2004

1 reference

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6 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

issue

1

0 references

page(s)

191

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/1471-2105-5-191

6 January 2020

exact match

0 references

cites work

Quantifying the relationship between co-expression, co-regulation and gene function

1 reference

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The Pfam protein families database

7 April 2017

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STACK: Sequence Tag Alignment and Consensus Knowledgebase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Gene ontology: tool for the unification of biology

7 April 2017

1 reference

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Basic local alignment search tool

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

The Gene Ontology (GO) database and informatics resource

7 April 2017

1 reference

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CAP3: A DNA sequence assembly program

7 April 2017

1 reference

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Quantitative monitoring of gene expression patterns with a complementary DNA microarray

7 April 2017

1 reference

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Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

7 April 2017

1 reference

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TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

ProbeLynx: a tool for updating the association of microarray probes to genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Maximizing the potential of functional genomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Potential indicators of stress response identified by expressed sequence tag analysis of hemocytes and embryos from the American oyster, Crassostrea virginica

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

PROBEmer: A web-based software tool for selecting optimal DNA oligos

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Hybridization cross-reactivity within homologous gene families on glass cDNA microarrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Immune gene discovery by expressed sequence tag analysis of hemocytes and hepatopancreas in the Pacific White Shrimp, Litopenaeus vannamei, and the Atlantic White Shrimp, L. setiferus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

The TIGR gene indices: reconstruction and representation of expressed gene sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

d2_cluster: a validated method for clustering EST and full-length cDNAsequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Using oligonucleotide probe arrays to access genetic diversity.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Diversity of the penaeidin antimicrobial peptides in two shrimp species

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Selection of oligonucleotide probes for protein coding sequences

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Immune gene discovery by expressed sequence tags generated from hemocytes of the bacteria-challenged oyster, Crassostrea gigas.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

PRIMEGENS: robust and efficient design of gene-specific probes for microarray analysis.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Selection of optimal DNA oligos for gene expression arrays

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Microarray-based analysis of gene expression in very large gene families: the cytochrome P450 gene superfamily of Arabidopsis thaliana.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

PrimeArray: genome-scale primer design for DNA-microarray construction.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

SIMPLE34: an improved and enhanced implementation for VAX and Sun computers of the SIMPLE algorithm for analysis of clustered repetitive motifs in nucleotide sequences.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539232

Cross-hybridization of closely related genes on high-density macroarrays

28 November 2018

1 reference

12 December 2020

Microarray probe selection strategies

1 reference

12 December 2020

ESTablishing a human transcript map

1 reference

12 December 2020

Avoiding cross hybridization by choosing nonredundant targets on cDNA arrays

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-5-191

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/ChenMWJCGWA04

6 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15585062%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

1 reference