(Q24813527)

4 July 2017

title

Evidence of a double-lid movement in Pseudomonas aeruginosa lipase: insights from molecular dynamics simulations (English)

1 reference

molecular dynamics simulation

4 July 2017

main subject

Pseudomonas aeruginosa

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0 references

author name string

Subbulakshmi Latha Cherukuvada

1

1 reference

4 July 2017

Aswin Sai Narain Seshasayee

2

1 reference

4 July 2017

Krishnan Raghunathan

3

1 reference

4 July 2017

Sharmila Anishetty

4

1 reference

4 July 2017

Gautam Pennathur

5

1 reference

4 July 2017

language of work or name

English

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publication date

12 August 2005

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PLOS Computational Biology

4 July 2017

published in

1 reference

4 July 2017

volume

1

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4 July 2017

issue

3

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4 July 2017

page(s)

e28

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Creative Commons Attribution 4.0 International

4 July 2017

copyright license

start time

12 August 2005

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Structural origins of the interfacial activation in Thermomyces (Humicola) lanuginosa lipase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Crystal structure of pseudomonas aeruginosa lipase in the open conformation. The prototype for family I.1 of bacterial lipases

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

The open conformation of a Pseudomonas lipase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Insights into interfacial activation from an open structure of Candida rugosa lipase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

1.8 A refined structure of the lipase from Geotrichum candidum

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

A serine protease triad forms the catalytic centre of a triacylglycerol lipase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

A model for interfacial activation in lipases from the structure of a fungal lipase-inhibitor complex

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

WHAT IF: a molecular modeling and drug design program

7 April 2017

1 reference

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Influence of a lipid interface on protein dynamics in a fungal lipase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

The alpha/beta hydrolase fold

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Computer simulations of enzyme catalysis: methods, progress, and insights

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Orientation and conformation of a lipase at an interface studied by molecular dynamics simulations

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Substrate entropy in enzyme enantioselectivity: an experimental and molecular modeling study of a lipase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Protein folding and unfolding at atomic resolution

28 September 2017

1 reference

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Bacterial biocatalysts: molecular biology, three-dimensional structures, and biotechnological applications of lipases

28 September 2017

1 reference

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Computational analysis of chain flexibility and fluctuations in Rhizomucor miehei lipase.

28 September 2017

1 reference

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Microbial lipases form versatile tools for biotechnology

28 September 2017

1 reference

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Lipases and alpha/beta hydrolase fold

28 September 2017

1 reference

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Pancreatic lipase structure-function relationships by domain exchange

28 September 2017

1 reference

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Insights from molecular dynamics simulations into pH-dependent enantioselective hydrolysis of ibuprofen esters by Candida rugosa lipase.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Triggering loops and enzyme function: identification of loops that trigger and modulate movements

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187864

Occurrence of a lipase in spores of Alternaria brassicicola with a crucial role in the infection of cauliflower leaves

28 November 2018

1 reference

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12 December 2020

inferred from PubMed ID database lookup

The crystal and molecular structure of the Rhizomucor miehei triacylglyceride lipase at 1.9 A resolution

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16110344

12 December 2020

inferred from PubMed ID database lookup

Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.0010028

7 January 2021

LINCS: A linear constraint solver for molecular simulations

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.0010028

7 January 2021

GROMACS 3.0: a package for molecular simulation and trajectory analysis

1 reference

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7 January 2021

GROMACS: A message-passing parallel molecular dynamics implementation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.0010028

7 January 2021

Molecular dynamics with coupling to an external bath

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.0010028

7 January 2021

A smooth particle mesh Ewald method

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.0010028

7 January 2021

10.1371/JOURNAL.PCBI.0010028

Identifiers

DOI

1 reference

journals/ploscb/CherukuvadaSRAG05

4 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

4 July 2017

1 reference