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Deep sequencing in library selection projects: what insight does it bring?
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Europe PubMed Central
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4648538
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26 February 2020
title
Deep sequencing in library selection projects: what insight does it bring?
(English)
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Europe PubMed Central
PMCID
4648538
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26 February 2020
main subject
structural biology
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Sai T Reddy
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4
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Europe PubMed Central
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4648538
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26 February 2020
Andrew R M Bradbury
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7
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4648538
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26 February 2020
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J Glanville
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1
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26 February 2020
S D'Angelo
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2
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26 February 2020
T A Khan
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3
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4648538
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26 February 2020
L Naranjo
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5
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4648538
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26 February 2020
F Ferrara
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6
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26 February 2020
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1 August 2015
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26 February 2020
published in
Current Opinion in Structural Biology
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PubMed
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26 February 2020
volume
33
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4648538
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26 February 2020
page(s)
146-160
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4648538
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26 February 2020
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
Expressed murine and human CDR-H3 intervals of equal length exhibit distinct repertoires that differ in their amino acid composition and predicted range of structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
In vivo recombination as a tool to generate molecular diversity in phage antibody libraries
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
Exploiting recombination in single bacteria to make large phage antibody libraries
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
A definitive set of oligonucleotide primers for amplifying human V regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
The structural basis of germline-encoded VH3 immunoglobulin binding to staphylococcal protein A
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
Isolation of high affinity human antibodies directly from large synthetic repertoires.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
Identical V region amino acid sequences and segments of sequences in antibodies of different specificities. Relative contributions of VH and VL genes, minigenes, and complementarity-determining regions to binding of antibody-combining sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
By-passing immunization. Human antibodies from V-gene libraries displayed on phage
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
Theoretical studies of clonal selection: Minimal antibody repertoire size and reliability of self-non-self discrimination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 September 2017
In-depth determination and analysis of the human paired heavy- and light-chain antibody repertoire
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
31 May 2018
Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
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31 May 2018
MiXCR: software for comprehensive adaptive immunity profiling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Reproducibility: Standardize antibodies used in research.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Concentration dependent viscosity of monoclonal antibody solutions: explaining experimental behavior in terms of molecular properties.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Using synthetic templates to design an unbiased multiplex PCR assay.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Practical innovations for high-throughput amplicon sequencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Conserved amino acid networks involved in antibody variable domain interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Analysis and improvements to Kabat and structurally correct numbering of antibody variable domains.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
In vitro selection and characterization of DARPins and Fab fragments for the co-crystallization of membrane proteins: The Na(+)-citrate symporter CitS as an example
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Characterization of the human Ig heavy chain antigen binding complementarity determining region 3 using a newly developed software algorithm, JOINSOLVER.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Yeast polypeptide fusion surface display levels predict thermal stability and soluble secretion efficiency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4648538
retrieved
28 November 2018
Rapid method for measuring ScFv thermal stability by yeast surface display
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/26451649
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Fv fragment-mediated crystallization of the membrane protein bacterial cytochrome c oxidase
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/26451649
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Selection of phage antibodies by binding affinity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.SBI.2015.09.001
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Erratum: Corrigendum: Performance comparison of benchtop high-throughput sequencing platforms
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.SBI.2015.09.001
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/J.SBI.2015.09.001
1 reference
stated in
Europe PubMed Central
PMCID
4648538
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26451649%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
PMCID
4648538
1 reference
stated in
Europe PubMed Central
PMCID
4648538
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26451649%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
PubMed ID
26451649
1 reference
stated in
Europe PubMed Central
PMCID
4648538
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26451649%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
ResearchGate publication ID
282703246
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