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The replication domain model: regulating replicon firing in the context of large-scale chromosome architecture
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title
The replication domain model: regulating replicon firing in the context of large-scale chromosome architecture
(English)
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author name string
Benjamin D. Pope
series ordinal
1
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David M. Gilbert
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2
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language of work or name
English
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publication date
29 November 2013
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published in
Journal of Molecular Biology
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volume
425
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PubMed
issue
23
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PubMed
page(s)
4690-5
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PubMed
cites work
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
7 April 2017
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
7 April 2017
Topological domains in mammalian genomes identified by analysis of chromatin interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
7 April 2017
Fluorescent probes of chromosome structure and replication
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
7 April 2017
High-frequency transformation of yeast: autonomous replication of hybrid DNA molecules
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
7 April 2017
Asynchronous replication, mono-allelic expression, and long range Cis-effects of ASAR6.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
3D chromatin conformation correlates with replication timing and is conserved in resting cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Mouse Rif1 is a key regulator of the replication-timing programme in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Regulation of DNA replication within the immunoglobulin heavy-chain locus during B cell commitment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Chromatin-interaction compartment switch at developmentally regulated chromosomal domains reveals an unusual principle of chromatin folding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replication-timing boundaries facilitate cell-type and species-specific regulation of a rearranged human chromosome in mouse
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Mammalian chromosomes contain cis-acting elements that control replication timing, mitotic condensation, and stability of entire chromosomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Abnormal developmental control of replication-timing domains in pediatric acute lymphoblastic leukemia
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replication fork polarity gradients revealed by megabase-sized U-shaped replication timing domains in human cell lines
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
USF binding sequences from the HS4 insulator element impose early replication timing on a vertebrate replicator.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Rif1 is a global regulator of timing of replication origin firing in fission yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replication timing: a fingerprint for cell identity and pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Genome-scale analysis of metazoan replication origins reveals their organization in specific but flexible sites defined by conserved features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
An autosomal locus that controls chromosome-wide replication timing and mono-allelic expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Chk1 inhibits replication factory activation but allows dormant origin firing in existing factories.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Comparative analysis of DNA replication timing reveals conserved large-scale chromosomal architecture.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Sequencing newly replicated DNA reveals widespread plasticity in human replication timing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Predictable dynamic program of timing of DNA replication in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Open chromatin encoded in DNA sequence is the signature of 'master' replication origins in human cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Global reorganization of replication domains during embryonic stem cell differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Global organization of replication time zones of the mouse genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
DNA replication timing of the human beta-globin domain is controlled by histone modification at the origin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Pan-S replication patterns and chromosomal domains defined by genome-tiling arrays of ENCODE genomic areas
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
DNA replication timing: random thoughts about origin firing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
A deletion at the mouse Xist gene exposes trans-effects that alter the heterochromatin of the inactive X chromosome and the replication time and DNA stability of both X chromosomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
An aneuploid mouse strain carrying human chromosome 21 with Down syndrome phenotypes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
A dynamic switch in the replication timing of key regulator genes in embryonic stem cells upon neural induction.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Differentiation-induced replication-timing changes are restricted to AT-rich/long interspersed nuclear element (LINE)-rich isochores
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replication timing of the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Asynchronous duplication of chromosomes in cultured cells of Chinese hamster.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replication and subnuclear location dynamics of the immunoglobulin heavy-chain locus in B-lineage cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Heterogeneity of eukaryotic replicons, replicon clusters, and replication foci
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Dynamics of DNA replication factories in living cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Spatial and temporal dynamics of DNA replication sites in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Spatial organization of large-scale chromatin domains in the nucleus: a magnified view of single chromosome territories.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Spatial distribution of DNA loop attachment and replicational sites in the nuclear matrix
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Replication program of active and inactive multigene families in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Regulation of DNA replication on subchromosomal units of mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Localization of DNA replicator sites near the nuclear membrane in plant cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 September 2017
Developmental control of replication timing defines a new breed of chromosomal domains with a novel mechanism of chromatin unfolding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
31 May 2018
Rif1 regulates the replication timing domains on the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
31 May 2018
The initiation of deoxyribonucleic acid synthesis in the connective-tissue cell, with some observations on the function of the nucleolus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
31 May 2018
Replication timing of genes and middle repetitive sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
31 May 2018
Replication factory activation can be decoupled from the replication timing program by modulating Cdk levels.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 November 2018
Turnover of nuclear and cytoplasmic ribonucleic acid in two types of animal cell, with some further observations on the nucleolus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3775993
retrieved
28 November 2018
The spatial position and replication timing of chromosomal domains are both established in early G1 phase
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Nuclear morphology and the ultrastructural localization of deoxyribonucleic acid synthesis during interphase
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Distribution of DNA replicator sites in mammalian nuclei after different methods of cell synchronization
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Localization of newly-synthesized DNA in a mammalian cell as visualized by high resolution autoradiography
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Characterization of Giemsa dark- and light-band DNA
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Replicon clusters may form structurally stable complexes of chromatin and chromosomes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A distinct G1 step required to specify the Chinese hamster DHFR replication origin
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The mode of chromosome duplication in Crepis capillaris
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23603017
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Histone H4 acetylation and replication timing in Chinese hamster chromosomes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.JMB.2013.04.014
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
On the size of the DNA in the mammalian chromosome. Structural subunits
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.JMB.2013.04.014
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The impact of chromatin modifiers on the timing of locus replication in mouse embryonic stem cells
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.JMB.2013.04.014
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Stable chromosomal units determine the spatial and temporal organization of DNA replication.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.JMB.2013.04.014
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
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DOI
10.1016/J.JMB.2013.04.014
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release_2rcoyplgvjevdi7ocmamo64ex4
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https://api.fatcat.wiki/v0/release/2rcoyplgvjevdi7ocmamo64ex4
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24 November 2022
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PMC publication ID
3775993
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PubMed
PubMed publication ID
23603017
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PubMed
ResearchGate publication ID
236251692
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