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Structural and functional coordination of DNA and histone methylation
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title
Structural and functional coordination of DNA and histone methylation
(English)
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PubMed
author name string
X. Cheng
series ordinal
1
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language of work or name
English
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publication date
1 August 2014
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published in
Cold Spring Harbor Perspectives in Biology
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volume
6
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PubMed
issue
8
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PubMed
cites work
DNA methylation in mammals
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
CpG island chromatin is shaped by recruitment of ZF-CxxC proteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
PHD finger recognition of unmodified histone H3R2 links UHRF1 to regulation of euchromatic gene expression
1 reference
stated in
PubMed Central
reference URL
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7 April 2017
The replication focus targeting sequence (RFTS) domain is a DNA-competitive inhibitor of Dnmt1
1 reference
stated in
PubMed Central
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Lysine methylation of the NF-κB subunit RelA by SETD6 couples activity of the histone methyltransferase GLP at chromatin to tonic repression of NF-κB signaling
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PubMed Central
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7 April 2017
Methyl-H3K9-binding protein MPP8 mediates E-cadherin gene silencing and promotes tumour cell motility and invasion
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PubMed Central
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7 April 2017
PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progression
1 reference
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PubMed Central
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7 April 2017
Histone H4K20/H3K9 demethylase PHF8 regulates zebrafish brain and craniofacial development
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PubMed Central
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7 April 2017
Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression
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PubMed Central
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7 April 2017
CpG islands recruit a histone H3 lysine 36 demethylase
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PubMed Central
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7 April 2017
The SNAG domain of Snail1 functions as a molecular hook for recruiting lysine-specific demethylase 1
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PubMed Central
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A functional link between the histone demethylase PHF8 and the transcription factor ZNF711 in X-linked mental retardation
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PubMed Central
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7 April 2017
PHF8 activates transcription of rRNA genes through H3K4me3 binding and H3K9me1/2 demethylation
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PubMed Central
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7 April 2017
KDM7 is a dual demethylase for histone H3 Lys 9 and Lys 27 and functions in brain development
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PubMed Central
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Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases
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7 April 2017
PHF8, a gene associated with cleft lip/palate and mental retardation, encodes for an Nepsilon-dimethyl lysine demethylase
1 reference
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PubMed Central
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7 April 2017
Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain
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7 April 2017
Human DNA methylomes at base resolution show widespread epigenomic differences
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7 April 2017
KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints
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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1
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7 April 2017
Structural basis for the requirement of additional factors for MLL1 SET domain activity and recognition of epigenetic marks
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7 April 2017
Genome-scale DNA methylation maps of pluripotent and differentiated cells
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7 April 2017
Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor
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7 April 2017
The interaction of the SRA domain of ICBP90 with a novel domain of DNMT1 is involved in the regulation of VEGF gene expression
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7 April 2017
p53 is regulated by the lysine demethylase LSD1
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7 April 2017
Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation
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7 April 2017
DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA
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7 April 2017
UHRF1 plays a role in maintaining DNA methylation in mammalian cells
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7 April 2017
Structural basis of LSD1-CoREST selectivity in histone H3 recognition
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Identification and characterization of the human Set1B histone H3-Lys4 methyltransferase complex
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Regulation of MBD1-mediated transcriptional repression by SUMO and PIAS proteins
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7 April 2017
FBXO11/PRMT9, a new protein arginine methyltransferase, symmetrically dimethylates arginine residues
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7 April 2017
LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription
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EUKARYOTIC CYTOSINE METHYLTRANSFERASES
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Structural and functional analysis of SET8, a histone H4 Lys-20 methyltransferase
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Specificity and mechanism of the histone methyltransferase Pr-Set7.
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7 April 2017
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
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In vitro and in vivo analyses of a Phe/Tyr switch controlling product specificity of histone lysine methyltransferases
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PRMT7, a new protein arginine methyltransferase that synthesizes symmetric dimethylarginine
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Mbd1 is recruited to both methylated and nonmethylated CpGs via distinct DNA binding domains
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PRMT7 is a member of the protein arginine methyltransferase family with a distinct substrate specificity
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Structural basis for the product specificity of histone lysine methyltransferases
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7 April 2017
Methyl-CpG binding domain 1 (MBD1) interacts with the Suv39h1-HP1 heterochromatic complex for DNA methylation-based transcriptional repression
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Structure and catalytic mechanism of the human histone methyltransferase SET7/9
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The DNA methyltransferase-like protein DNMT3L stimulates de novo methylation by Dnmt3a
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7 April 2017
Structure of the Neurospora SET domain protein DIM-5, a histone H3 lysine methyltransferase
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7 April 2017
A novel Dnmt3a isoform produced from an alternative promoter localizes to euchromatin and its expression correlates with active de novo methylation
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7 April 2017
The methylosome, a 20S complex containing JBP1 and pICln, produces dimethylarginine-modified Sm proteins
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7 April 2017
Translating the Histone Code
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Regulation of chromatin structure by site-specific histone H3 methyltransferases
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7 April 2017
Crystal structure of the conserved core of protein arginine methyltransferase PRMT3
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7 April 2017
DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci
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7 April 2017
The discovery of histone demethylases
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7 April 2017
Crystal structure of the human PRMT5:MEP50 complex
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7 April 2017
Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants
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7 April 2017
An allosteric inhibitor of protein arginine methyltransferase 3
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7 April 2017
The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier–Gorlin syndrome
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7 April 2017
Structure-Based Mechanistic Insights into DNMT1-Mediated Maintenance DNA Methylation
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7 April 2017
MPP8 mediates the interactions between DNA methyltransferase Dnmt3a and H3K9 methyltransferase GLP/G9a
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7 April 2017
Molecular Mimicry and Ligand Recognition in Binding and Catalysis by the Histone Demethylase LSD1-CoREST Complex
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7 April 2017
Structure of DNMT1-DNA Complex Reveals a Role for Autoinhibition in Maintenance DNA Methylation
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7 April 2017
A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability
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7 April 2017
Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
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Structure of the MLL CXXC domain-DNA complex and its functional role in MLL-AF9 leukemia.
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7 April 2017
Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger
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7 April 2017
UHRF1, a modular multi-domain protein, regulates replication-coupled crosstalk between DNA methylation and histone modifications
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7 April 2017
The ankyrin repeats of G9a and GLP histone methyltransferases are mono- and dimethyllysine binding modules
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7 April 2017
Functional insights from structures of coactivator-associated arginine methyltransferase 1 domains
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7 April 2017
Insights into histone code syntax from structural and biochemical studies of CARM1 methyltransferase
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7 April 2017
Structure of the catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase
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7 April 2017
The PWWP domain of mammalian DNA methyltransferase Dnmt3b defines a new family of DNA-binding folds
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7 April 2017
The language of covalent histone modifications
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7 April 2017
Histone demethylation by a family of JmjC domain-containing proteins
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7 April 2017
hDOT1L links histone methylation to leukemogenesis
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7 April 2017
Identification of high-copy disruptors of telomeric silencing in Saccharomyces cerevisiae
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7 April 2017
New 5' regions of the murine and human genes for DNA (cytosine-5)-methyltransferase
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin
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PubMed Central
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7 April 2017
A novel WD repeat protein component of the methylosome binds Sm proteins
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PubMed Central
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7 April 2017
Regulation of transcription by a protein methyltransferase
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PubMed Central
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7 April 2017
Structural studies on human 2-oxoglutarate dependent oxygenases
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PubMed Central
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7 April 2017
The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Defining an epigenetic code
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PubMed Central
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7 April 2017
Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Ordered cooperative functions of PRMT1, p300, and CARM1 in transcriptional activation by p53
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PubMed Central
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7 April 2017
DNMT3L stimulates the DNA methylation activity of Dnmt3a and Dnmt3b through a direct interaction
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Human DNA-(Cytosine-5) Methyltransferase-PCNA Complex as a Target for p21WAF1
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PubMed Central
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7 April 2017
Nucleosomes containing methylated DNA stabilize DNA methyltransferases 3A/3B and ensure faithful epigenetic inheritance
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
DNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
The PWWP domain of Dnmt3a and Dnmt3b is required for directing DNA methylation to the major satellite repeats at pericentric heterochromatin
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting
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PubMed Central
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7 April 2017
A novel mammalian flavin-dependent histone demethylase
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Histone and DNA methylation defects at Hox genes in mice expressing a SET domain-truncated form of Mll.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
MLL targets SET domain methyltransferase activity to Hox gene promoters
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Protein arginine methylation in mammals: who, what, and why
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7 April 2017
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Heterochromatin revisited
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7 April 2017
JmjC-domain-containing proteins and histone demethylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Many paths to methyltransfer: a chronicle of convergence
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
A targeting sequence directs DNA methyltransferase to sites of DNA replication in mammalian nuclei
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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7 April 2017
Histone variants and epigenetics
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Expanding the epigenetic landscape: novel modifications of cytosine in genomic DNA.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Writers and readers of histone acetylation: structure, mechanism, and inhibition
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Erasers of histone acetylation: the histone deacetylase enzymes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Nucleosome remodeling and epigenetics.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Epigenetics in Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Association of UHRF1 with methylated H3K9 directs the maintenance of DNA methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Selective killing of mixed lineage leukemia cells by a potent small-molecule DOT1L inhibitor.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1)
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
H3K9 methyltransferase G9a and the related molecule GLP.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
The C-terminal domain of RNA polymerase II is modified by site-specific methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Lysine methyltransferase G9a is required for de novo DNA methylation and the establishment, but not the maintenance, of proviral silencing
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Molecular coupling of DNA methylation and histone methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
A modified epigenetics toolbox to study histone modifications on the nucleosome core.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Structural insights into histone lysine demethylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
DNA methylation and cellular reprogramming
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
The Dnmt3a PWWP domain reads histone 3 lysine 36 trimethylation and guides DNA methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
PHF8 targets histone methylation and RNA polymerase II to activate transcription.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
CpG islands influence chromatin structure via the CpG-binding protein Cfp1.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Mixed lineage leukemia: roles in gene expression, hormone signaling and mRNA processing.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Mixed lineage leukemia: a structure-function perspective of the MLL1 protein
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Coordinated chromatin control: structural and functional linkage of DNA and histone methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Proviral silencing in embryonic stem cells requires the histone methyltransferase ESET.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
A case study in cross-talk: the histone lysine methyltransferases G9a and GLP.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
The N-terminus of histone H3 is required for de novo DNA methylation in chromatin
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Selective anchoring of DNA methyltransferases 3A and 3B to nucleosomes containing methylated DNA.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
PRMT5-mediated methylation of histone H4R3 recruits DNMT3A, coupling histone and DNA methylation in gene silencing.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Human protein arginine methyltransferases in vivo--distinct properties of eight canonical members of the PRMT family
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Formation of nucleoprotein filaments by mammalian DNA methyltransferase Dnmt3a in complex with regulator Dnmt3L.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
The MBD protein family-reading an epigenetic mark?
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Mammalian DNA methyltransferases: a structural perspective
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Phosphorylation-mediated inactivation of coactivator-associated arginine methyltransferase 1.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Delivery of 5-aza-2'-deoxycytidine to cells using oligodeoxynucleotides
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Non-heme dioxygenases: cellular sensors and regulators jelly rolled into one?
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Direct spectroscopic detection of a C-H-cleaving high-spin Fe(IV) complex in a prolyl-4-hydroxylase
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
The control of histone lysine methylation in epigenetic regulation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
CpG-binding protein (CXXC finger protein 1) is a component of the mammalian Set1 histone H3-Lys4 methyltransferase complex, the analogue of the yeast Set1/COMPASS complex
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Structural and sequence motifs of protein (histone) methylation enzymes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Methylation: lost in hydroxylation?
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Meiotic and epigenetic defects in Dnmt3L-knockout mouse spermatogenesis.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Structure of the conserved core of the yeast Dot1p, a nucleosomal histone H3 lysine 79 methyltransferase
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Crosstalk between CARM1 methylation and CBP acetylation on histone H3.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Gene silencing: trans-histone regulatory pathway in chromatin
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
LCX, leukemia-associated protein with a CXXC domain, is fused to MLL in acute myeloid leukemia with trilineage dysplasia having t(10;11)(q22;q23).
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Histone methylation: dynamic or static?
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
Synergy among nuclear receptor coactivators: selective requirement for protein methyltransferase and acetyltransferase activities
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
The BAH (bromo-adjacent homology) domain: a link between DNA methylation, replication and transcriptional regulation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
SET domain proteins modulate chromatin domains in eu- and heterochromatin.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
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28 September 2017
5-Methylcytosine is not detectable in Saccharomyces cerevisiae DNA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 September 2017
Cytosine-specific type II DNA methyltransferases. A conserved enzyme core with variable target-recognizing domains
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 September 2017
S-Adenosylmethionine:protein-arginine methyltransferase. Purification and mechanism of the enzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 September 2017
Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
31 May 2018
A histone H3 methyltransferase controls DNA methylation in Neurospora crassa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
31 May 2018
Biological methylation of myelin basic protein: enzymology and biological significance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
31 May 2018
A lysine-rich region in Dot1p is crucial for direct interaction with H2B ubiquitylation and high level methylation of H3K79.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
The SRA methyl-cytosine-binding domain links DNA and histone methylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
Human histone demethylase LSD1 reads the histone code
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
TET1, a member of a novel protein family, is fused to MLL in acute myeloid leukemia containing the t(10;11)(q22;q23).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
Histone H3-lysine 9 methylation is associated with aberrant gene silencing in cancer cells and is rapidly reversed by 5-aza-2'-deoxycytidine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
Dnmt3L and the establishment of maternal genomic imprints
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
PRMT5 (Janus Kinase-binding Protein 1) Catalyzes the Formation of Symmetric Dimethylarginine Residues in Proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4107986
retrieved
28 November 2018
JmjC: cupin metalloenzyme-like domains in jumonji, hairless and phospholipase A2β
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25085914
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Chromatin silencing protein and pachytene checkpoint regulator Dot1p has a methyltransferase fold
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25085914
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Expression of murine DNA methyltransferases Dnmt1 and Dnmt3a in the yeast Saccharomyces cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25085914
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A Structural Perspective on Readout of Epigenetic Histone and DNA Methylation Marks
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25085914
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/CSHPERSPECT.A018747
0 references
Fatcat ID
release_a53dv3fttraofaq6n2hpumhhh4
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/a53dv3fttraofaq6n2hpumhhh4
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PMC publication ID
4107986
1 reference
stated in
PubMed
PubMed publication ID
25085914
1 reference
stated in
PubMed
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