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Nucleosome remodeling and epigenetics.
scientific article published on September 2013
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Europe PubMed Central
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3753709
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19 February 2020
title
Nucleosome remodeling and epigenetics
(English)
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Europe PubMed Central
PMC publication ID
3753709
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24003213%20AND%20SRC:MED&resulttype=core&format=json
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19 February 2020
main subject
epigenetics
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author
Peter B Becker
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1
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Europe PubMed Central
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3753709
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24003213%20AND%20SRC:MED&resulttype=core&format=json
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19 February 2020
author name string
Jerry L Workman
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2
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Europe PubMed Central
PMC publication ID
3753709
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19 February 2020
publication date
1 September 2013
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19 February 2020
published in
Cold Spring Harbor Perspectives in Biology
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PMC publication ID
3753709
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19 February 2020
volume
5
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Europe PubMed Central
PMC publication ID
3753709
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19 February 2020
issue
9
1 reference
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Europe PubMed Central
PMC publication ID
3753709
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24003213%20AND%20SRC:MED&resulttype=core&format=json
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19 February 2020
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Novel Mi-2 related ATP-dependent chromatin remodelers
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14 September 2017
The biology of chromatin remodeling complexes
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14 September 2017
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14 September 2017
ATP-dependent chromatin remodeling enzymes and their various roles in cell cycle control.
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RSF governs silent chromatin formation via histone H2Av replacement
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SWI/SNF mediates polycomb eviction and epigenetic reprogramming of the INK4b-ARF-INK4a locus
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Chromatin remodelling at promoters suppresses antisense transcription
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Mechanisms of ATP dependent chromatin remodeling
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14 September 2017
Histone modifications in response to DNA damage.
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14 September 2017
Snf2 family ATPases and DExx box helicases: differences and unifying concepts from high-resolution crystal structures
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14 September 2017
The roles of chromatin remodelling factors in replication
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14 September 2017
Nucleosome displacement in transcription
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14 September 2017
Rsc4 connects the chromatin remodeler RSC to RNA polymerases
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14 September 2017
Chromatin remodelling: the industrial revolution of DNA around histones
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14 September 2017
Regulation of higher-order chromatin structures by nucleosome-remodelling factors.
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14 September 2017
Direct observation of DNA distortion by the RSC complex
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14 September 2017
Chromatin remodeling in DNA replication.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Mi-2/NuRD: multiple complexes for many purposes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
The many colours of chromodomains.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Functional analysis of the subunits of the chromatin assembly factor RSF
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Recent advances in understanding chromatin remodeling by Swi/Snf complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
ATP-dependent nucleosome remodeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Emerging roles for chromatin remodeling in cancer biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
The bromodomain: a regulator of ATP-dependent chromatin remodeling?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Chromatin remodeling enzymes: who's on first?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
ATP-dependent chromatin-remodeling complexes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
ATP-dependent remodeling and acetylation as regulators of chromatin fluidity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
ACF consists of two subunits, Acf1 and ISWI, that function cooperatively in the ATP-dependent catalysis of chromatin assembly
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Alteration of nucleosome structure as a mechanism of transcriptional regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
ISWI, a member of the SWI2/SNF2 ATPase family, encodes the 140 kDa subunit of the nucleosome remodeling factor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Identification and characterization of Drosophila relatives of the yeast transcriptional activator SNF2/SWI2.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Cell-free system for assembly of transcriptionally repressed chromatin from Drosophila embryos.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
YY1 functions with INO80 to activate transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Functional differentiation of SWI/SNF remodelers in transcription and cell cycle control
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
dMi-2 chromatin binding and remodeling activities are regulated by dCK2 phosphorylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Growth inhibition by the mammalian SWI-SNF subunit Brm is regulated by acetylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
DNAase I-hypersensitive sites of chromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
14 September 2017
Gcn5 regulates the dissociation of SWI/SNF from chromatin by acetylation of Swi2/Snf2.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
29 September 2017
NoRC-dependent nucleosome positioning silences rRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
29 September 2017
Energy-dependent chromatin accessibility and nucleosome mobility in a cell-free system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
29 September 2017
Glucocorticoids are required for establishment and maintenance of an alteration in chromatin structure: induction leads to a reversible disruption of nucleosomes over an enhancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
29 September 2017
Widespread remodeling of mid-coding sequence nucleosomes by Isw1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
Structure of a RSC-nucleosome complex and insights into chromatin remodeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
Activation domains drive nucleosome eviction by SWI/SNF.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
Antagonistic forces that position nucleosomes in vivo.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
Identification of multiple distinct Snf2 subfamilies with conserved structural motifs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
DNA binding within the nucleosome core
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
ATP-dependent nucleosome reconfiguration and transcriptional activation from preassembled chromatin templates
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
27 June 2018
SnapShot: Chromatin remodeling: CHD.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
The ACF1 complex is required for DNA double-strand break repair in human cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
Nucleosomes can invade DNA territories occupied by their neighbors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
Toutatis, a TIP5-related protein, positively regulates Pannier function during Drosophila neural development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
The Drosophila trithorax group protein Kismet facilitates an early step in transcriptional elongation by RNA Polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
A role for transcriptional repressors in targeting the yeast Swi/Snf complex.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3753709
retrieved
3 September 2018
SHREC, an effector complex for heterochromatic transcriptional silencing
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24003213
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24003213
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
SnapShot: Chromatin remodeling: SWI/SNF
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24003213
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
SnapShot: Chromatin remodeling: ISWI
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24003213
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A Structural Perspective on Readout of Epigenetic Histone and DNA Methylation Marks
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24003213
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Maintenance of Epigenetic Information
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24003213
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/CSHPERSPECT.A017905
1 reference
stated in
Europe PubMed Central
PMC publication ID
3753709
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24003213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 February 2020
PMC publication ID
3753709
1 reference
stated in
Europe PubMed Central
PMC publication ID
3753709
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24003213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 February 2020
PubMed publication ID
24003213
1 reference
stated in
Europe PubMed Central
PMC publication ID
3753709
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24003213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 February 2020
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