(Q33797842)

29 July 2017

title

Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level (English)

1 reference

29 July 2017

4

1 reference

29 July 2017

7

Uwe Ohler

1 reference

29 July 2017

Elizabeth A Rach

1

1 reference

29 July 2017

Deborah R Winter

2

1 reference

29 July 2017

Ashlee M Benjamin

3

1 reference

29 July 2017

Ting Ni

5

1 reference

29 July 2017

Jun Zhu

6

1 reference

29 July 2017

language of work or name

1 reference

13 January 2011

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29 July 2017

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29 July 2017

volume

7

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29 July 2017

issue

1

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29 July 2017

page(s)

e1001274

1 reference

Creative Commons Attribution 4.0 International

29 July 2017

copyright license

start time

13 January 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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4 July 2018

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Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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Two strategies for gene regulation by promoter nucleosomes

4 July 2018

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Nucleosome organization in the Drosophila genome.

4 July 2018

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Dynamic regulation of nucleosome positioning in the human genome

4 July 2018

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High-resolution mapping and characterization of open chromatin across the genome

4 July 2018

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4 July 2018

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RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

4 July 2018

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Genomic regulatory blocks underlie extensive microsynteny conservation in insects

4 July 2018

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4 July 2018

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4 July 2018

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Histone replacement marks the boundaries of cis-regulatory domains

4 July 2018

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4 July 2018

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CTCF interacts with and recruits the largest subunit of RNA polymerase II to CTCF target sites genome-wide

4 July 2018

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Identification of core promoter modules in Drosophila and their application in accurate transcription start site prediction

4 July 2018

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GAGA protein: a multi-faceted transcription factor

4 July 2018

1 reference

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Comparative genomics of Drosophila and human core promoters

4 July 2018

1 reference

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Genome-wide analysis of mammalian promoter architecture and evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Assembly of variant histones into chromatin

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Comparative analysis of chromatin landscape in regulatory regions of human housekeeping and tissue specific genes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

A determining influence for CpG dinucleotides on nucleosome positioning in vitro

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

TRF2 associates with DREF and directs promoter-selective gene expression in Drosophila

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

GAGA can mediate enhancer function in trans by linking two separate DNA molecules

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Determinants of CpG islands: expression in early embryo and isochore structure

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Co-operative DNA binding by GAGA transcription factor requires the conserved BTB/POZ domain and reorganizes promoter topology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

CpG islands in vertebrate genomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020932

Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome

4 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001274

Genome wide ChIP-chip analyses reveal important roles for CTCF in Drosophila genome organization.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001274

Biological function of unannotated transcription during the early development of Drosophila melanogaster

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001274

Nucleosome positions predicted through comparative genomics

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21249180

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

CpG methylation remodels chromatin structure in vitro

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21249180

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1001274

1 reference

29 July 2017

1 reference

29 July 2017

1 reference