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Large-scale chromatin organization: the good, the surprising, and the still perplexing
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title
Large-scale chromatin organization: the good, the surprising, and the still perplexing
(English)
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author name string
Andrew S Belmont
series ordinal
1
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language of work or name
English
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publication date
February 2014
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published in
Current Opinion in Cell Biology
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volume
26
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PubMed
page(s)
69-78
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PubMed
cites work
Domain-wide regulation of gene expression in the human genome
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PubMed Central
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7 April 2017
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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7 April 2017
Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription
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7 April 2017
Controlling long-range genomic interactions at a native locus by targeted tethering of a looping factor
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PubMed Central
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7 April 2017
Topological domains in mammalian genomes identified by analysis of chromatin interactions
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PubMed Central
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7 April 2017
Multiple functions of Ldb1 required for beta-globin activation during erythroid differentiation
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PubMed Central
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7 April 2017
Spatial partitioning of the regulatory landscape of the X-inactivation centre
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7 April 2017
Architectural protein subclasses shape 3D organization of genomes during lineage commitment
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PubMed Central
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28 September 2017
Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
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PubMed Central
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28 September 2017
Genome architecture: domain organization of interphase chromosomes
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PubMed Central
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28 September 2017
Chromosomal domains: epigenetic contexts and functional implications of genomic compartmentalization
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PubMed Central
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28 September 2017
Chromatin structure outside and inside the nucleus
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Nuclear aggregation of olfactory receptor genes governs their monogenic expression
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28 September 2017
A misplaced lncRNA causes brachydactyly in humans
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PubMed Central
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28 September 2017
Gene density, transcription, and insulators contribute to the partition of the Drosophila genome into physical domains
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Iterative correction of Hi-C data reveals hallmarks of chromosome organization
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
The potential of 3D-FISH and super-resolution structured illumination microscopy for studies of 3D nuclear architecture: 3D structured illumination microscopy of defined chromosomal structures visualized by 3D (immuno)-FISH opens new perspectives fo
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Revisiting higher-order and large-scale chromatin organization
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Chromatin organization - the 30 nm fiber
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Three-dimensional folding and functional organization principles of the Drosophila genome
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Chromosome organization in the nucleus - charting new territory across the Hi-Cs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
A decade of 3C technologies: insights into nuclear organization
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Enhancer and promoter interactions-long distance calls
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Unravelling global genome organization by 3C-seq
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Diverse gene reprogramming events occur in the same spatial clusters of distal regulatory elements
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Functional nuclear organization of transcription and DNA replication: a topographical marriage between chromatin domains and the interchromatin compartment.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Systematic protein location mapping reveals five principal chromatin types in Drosophila cells
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Chromatin structure: does the 30-nm fibre exist in vivo?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Evidence for heteromorphic chromatin fibers from analysis of nucleosome interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
retrieved
28 September 2017
Large-scale chromatin structure of inducible genes: transcription on a condensed, linear template.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
P-STAT1 mediates higher-order chromatin remodelling of the human MHC in response to IFNgamma
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
retrieved
28 September 2017
Visualization of early chromosome condensation: a hierarchical folding, axial glue model of chromosome structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
retrieved
28 September 2017
Spatial preservation of nuclear chromatin architecture during three-dimensional fluorescence in situ hybridization (3D-FISH).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Large-scale chromatin decondensation and recondensation regulated by transcription from a natural promoter
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Analysis of mammalian central nervous system gene expression and function using bacterial artificial chromosome-mediated transgenesis
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Electron spectroscopic imaging of chromatin
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Spatial and temporal dynamics of DNA replication sites in mammalian cells
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Three-dimensional organization of Drosophila melanogaster interphase nuclei. II. Chromosome spatial organization and gene regulation
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 September 2017
Disclosure of a structural milieu for the proximity ligation reveals the elusive nature of an active chromatin hub.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
retrieved
31 May 2018
Insights into interphase large-scale chromatin structure from analysis of engineered chromosome regions
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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31 May 2018
Chromosome structure in four wild-type polytene tissues of Drosophila melanogaster. The 87A and 87C heat shock loci are induced unequally in the midgut in a manner dependent on growth temperature.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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31 May 2018
Large-scale chromatin structural domains within mitotic and interphase chromosomes in vivo and in vitro
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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31 May 2018
The fixation of nuclei and chromosomes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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31 May 2018
Immunostaining of DNA in electron microscopy: an amplification and staining procedure for thin sections as alternative to gold labeling.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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31 May 2018
A detailed protocol for formaldehyde-assisted isolation of regulatory elements (FAIRE).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
retrieved
28 November 2018
Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 November 2018
Chromosomal dynamics at the Shh locus: limb bud-specific differential regulation of competence and active transcription.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 November 2018
In vivo immunogold labeling confirms large-scale chromatin folding motifs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 November 2018
The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 November 2018
Manipulating the mouse genome to engineer precise functional syntenic replacements with human sequence.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 November 2018
Synthesis of a more stable osmium ammine electron-dense DNA stain
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927141
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28 November 2018
Localisation of rapidly and slowly labelled nuclear RNA as visualized by high resolution autoradiography
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24529248
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A specific ultrastructural method to reveal DNA: the NAMA-Ur
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24529248
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Replicon clusters may form structurally stable complexes of chromatin and chromosomes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24529248
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.CEB.2013.10.002
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2503297
OpenCitations bibliographic resource ID
2503297
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2503297
PMCID
3927141
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2503297
PubMed ID
24529248
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2503297
ResearchGate publication ID
260217463
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