(Q34995401)

5 August 2017

title

Evidence for heteromorphic chromatin fibers from analysis of nucleosome interactions (English)

1 reference

5 August 2017

5

Tamar Schlick

1 reference

5 August 2017

Sergei A Grigoryev

1

1 reference

5 August 2017

Gaurav Arya

series ordinal

2

1 reference

5 August 2017

Sarah Correll

series ordinal

3

1 reference

5 August 2017

Christopher L Woodcock

series ordinal

4

1 reference

5 August 2017

language of work or name

English

0 references

publication date

27 July 2009

1 reference

Proceedings of the National Academy of Sciences of the United States of America

5 August 2017

published in

1 reference

5 August 2017

volume

106

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5 August 2017

issue

32

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5 August 2017

page(s)

13317-13322

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Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Spontaneous access to DNA target sites in folded chromatin fibers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Hydrodynamic studies on defined heterochromatin fragments support a 30-nm fiber having six nucleosomes per turn

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Chromatin fiber structure: Where is the problem now?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

An all-atom model of the chromatin fiber containing linker histones reveals a versatile structure tuned by the nucleosomal repeat length

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Higher-order structures of chromatin: the elusive 30 nm fiber

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

The H3 tail domain participates in multiple interactions during folding and self-association of nucleosome arrays

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Chromatin structure can strongly facilitate enhancer action over a distance

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Role of histone tails in chromatin folding revealed by a mesoscopic oligonucleosome model

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

EM measurements define the dimensions of the "30-nm" chromatin fiber: evidence for a compact, interdigitated structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Flexible histone tails in a new mesoscopic oligonucleosome model

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Mapping the interaction surface of linker histone H1(0) with the nucleosome of native chromatin in vivo

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

X-ray structure of a tetranucleosome and its implications for the chromatin fibre

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Electrostatic mechanism of nucleosomal array folding revealed by computer simulation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Nucleosome and chromatin fiber dynamics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

A method for the in vitro reconstitution of a defined "30 nm" chromatin fibre containing stoichiometric amounts of the linker histone

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Nucleosome arrays reveal the two-start organization of the chromatin fiber

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Keeping fingers crossed: heterochromatin spreading through interdigitation of nucleosome arrays

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Conformation of reconstituted mononucleosomes and effect of linker histone H1 binding studied by scanning force microscopy

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

The structure of DNA in the nucleosome core

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Controlling the double helix

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Computer simulation of the 30-nanometer chromatin fiber.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Cation-chromatin binding as shown by ion microscopy is essential for the structural integrity of chromosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

DNA folding: structural and mechanical properties of the two-angle model for chromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Higher-order structure of chromatin and chromosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Crystal structure of the nucleosome core particle at 2.8 A resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbon

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

The higher-order structure of chromatin: evidence for a helical ribbon arrangement

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Linker DNA bending induced by the core histones of chromatin.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726360

Single-molecule force spectroscopy reveals a highly compliant helical folding for the 30-nm chromatin fiber

8 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Nucleosome geometry and internucleosomal interactions control the chromatin fiber conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

The effect of internucleosomal interaction on folding of the chromatin fiber

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Pulling chromatin fibers: computer simulations of direct physical micromanipulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Computational modeling predicts the structure and dynamics of chromatin fiber

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

A tale of tails: how histone tails mediate chromatin compaction in different salt and linker histone environments

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Formaldehyde cross-linking for studying nucleosomal dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Chromatin compaction at the mononucleosome level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Dinucleosomes show compaction by ionic strength, consistent with bending of linker DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Physical Constraints in the Condensation of Eukaryotic Chromosomes. Local Concentration of DNA versus Linear Packing Ratio in Higher Order Chromatin Structures†

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903280106

Frictional coefficients of multisubunit structures. I. Theory

21 January 2018

1 reference

12 December 2020

Nucleosome interactions in chromatin: fiber stiffening and hairpin formation

1 reference

12 December 2020

Structural studies of chromatin by using proteases

1 reference

12 December 2020

Reversible oligonucleosome self-association: dependence on divalent cations and core histone tail domains

1 reference

12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

12 December 2020

Linker histones stabilize the intrinsic salt-dependent folding of nucleosomal arrays: mechanistic ramifications for higher-order chromatin folding

1 reference

12 December 2020

The core histone N-terminal tail domains function independently and additively during salt-dependent oligomerization of nucleosomal arrays

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0903280106

1 reference

5 August 2017

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1 reference

5 August 2017

1 reference