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Transmembrane helix dimerization: beyond the search for sequence motifs
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scholarly article
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Europe PubMed Central
title
Transmembrane helix dimerization: beyond the search for sequence motifs
(English)
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PubMed
main subject
transmembrane protein
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author
Kalina Hristova
series ordinal
3
object named as
Kalina Hristova
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Crossref
author name string
Edwin Li
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1
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William C. Wimley
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2
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language of work or name
English
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PubMed
publication date
February 2012
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PubMed
published in
Biochimica et Biophysica Acta
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stated in
PubMed
volume
1818
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stated in
PubMed
page(s)
183-93
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PubMed
issue
2
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PubMed
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Aromatic and cation-pi interactions enhance helix-helix association in a membrane environment
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28 September 2017
Two motifs within a transmembrane domain, one for homodimerization and the other for heterodimerization
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28 September 2017
Specificity in transmembrane helix-helix interactions can define a hierarchy of stability for sequence variants
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Mutations affecting transmembrane segment interactions impair adhesiveness of E-cadherin
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28 September 2017
Folding of beta-sheet membrane proteins: a hydrophobic hexapeptide model
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28 September 2017
2H nuclear magnetic resonance order parameter profiles suggest a change of molecular shape for phosphatidylcholines containing a polyunsaturated acyl chain
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28 September 2017
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28 September 2017
Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. III. Complete structure
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28 September 2017
Sequence specificity in the dimerization of transmembrane alpha-helices
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28 September 2017
Subunit structure of human erythrocyte glycophorin A
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The extracellular domain of fibroblast growth factor receptor 3 inhibits ligand-independent dimerization
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31 May 2018
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31 May 2018
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31 May 2018
Forster resonance energy transfer measurements of transmembrane helix dimerization energetics
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
Changes in apparent free energy of helix-helix dimerization in a biological membrane due to point mutations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
Arginine mutations within a transmembrane domain of Tar, an Escherichia coli aspartate receptor, can drive homodimer dissociation and heterodimer association in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
Sequence context strongly modulates association of polar residues in transmembrane helices
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
Multiple independent activations of the neu oncogene by a point mutation altering the transmembrane domain of p185.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
A point mutation in the neu oncogene mimics ligand induction of receptor aggregation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
31 May 2018
Dramatic destabilization of transmembrane helix interactions by features of natural membrane environments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The membrane environment modulates self-association of the human GpA TM domain--implications for membrane protein folding and transmembrane signaling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The effect of hydrophilic substitutions and anionic lipids upon the transverse positioning of the transmembrane helix of the ErbB2 (neu) protein incorporated into model membrane vesicles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The single transmembrane domains of human receptor tyrosine kinases encode self-interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Two GxxxG-like motifs facilitate promiscuous interactions of the human ErbB transmembrane domains
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Pathogenic activation of receptor tyrosine kinases in mammalian membranes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Transmembrane domain of EphA1 receptor forms dimers in membrane-like environment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Lipophobicity and the residue environments of the transmembrane alpha-helical bundle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Molecular code for transmembrane-helix recognition by the Sec61 translocon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Effect of pathogenic cysteine mutations on FGFR3 transmembrane domain dimerization in detergents and lipid bilayers.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The achondroplasia mutation does not alter the dimerization energetics of the fibroblast growth factor receptor 3 transmembrane domain.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The Stability of Transmembrane Helix Interactions Measured in a Biological Membrane
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
FGFR3 dimer stabilization due to a single amino acid pathogenic mutation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Synthesis and initial characterization of FGFR3 transmembrane domain: consequences of sequence modifications
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Complex interactions at the helix-helix interface stabilize the glycophorin A transmembrane dimer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Motifs of two small residues can assist but are not sufficient to mediate transmembrane helix interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Lipid modulation of protein-induced membrane domains as a mechanism for controlling signal transduction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The composition rather than position of polar residues (QxxS) drives aspartate receptor transmembrane domain dimerization in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Structural implications of placing cationic residues at either the NH2- or COOH-terminus in a pore-forming synthetic peptide
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
GALLEX, a measurement of heterologous association of transmembrane helices in a biological membrane
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Transmembrane domain mediated self-assembly of major coat protein subunits from Ff bacteriophage
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The single transmembrane domains of ErbB receptors self-associate in cell membranes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Energetics, stability, and prediction of transmembrane helices
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Structure of the transmembrane dimer interface of glycophorin A in membrane bilayers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
The effect of point mutations on the free energy of transmembrane alpha-helix dimerization.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Dimerisation of the glycophorin A transmembrane segment in membranes probed with the ToxR transcription activator.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Proteolytic analysis of the topological arrangement of red cell phosphoproteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Cholera toxin transcriptional activator toxR is a transmembrane DNA binding protein.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3253898
retrieved
28 November 2018
Structure prediction of the dimeric neu/ErbB-2 transmembrane domain from multi-nanosecond molecular dynamics simulations
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Peptide mimics of the M13 coat protein transmembrane segment. Retention of helix-helix interaction motifs
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Sequence-specific Dimerization of the Transmembrane Domain of the “BH3-only” Protein BNIP3 in Membranes and Detergent
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Sequence context modulates the stability of a GxxxG-mediated transmembrane helix-helix dimer
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The glycophorin A transmembrane domain dimer: Sequence-specific propensity for a right-handed supercoil of helixes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A dimerization motif for transmembrane α–helices
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A heptad motif of leucine residues found in membrane proteins can drive self-assembly of artificial transmembrane segments
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Molecular dynamics simulation approach for the prediction of transmembrane helix-helix heterodimers assembly
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Transmembrane helix packing of ErbB/Neu receptor in membrane environment: a molecular dynamics study
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Detergents modulate dimerization, but not helicity, of the glycophorin A transmembrane domain
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Interhelical hydrogen bonding drives strong interactions in membrane proteins
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21910966
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.BBAMEM.2011.08.031
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3247107
OpenCitations bibliographic resource ID
3247107
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3247107
PMCID
3253898
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3247107
PubMed ID
21910966
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3247107
ResearchGate publication ID
51631328
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