(Q27008321)

Sriharsa Pradhan

series ordinal

2

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language of work or name

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April 2014

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66

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PubMed

issue

4

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PubMed

page(s)

240-56

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DNA methylation dynamics during the mammalian life cycle

PubMed

cites work

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Charting a dynamic DNA methylation landscape of the human genome

21 January 2018

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DiseaseMeth: a human disease methylation database

21 January 2018

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Translating the Histone Code

21 January 2018

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CTCF-mediated functional chromatin interactome in pluripotent cells

21 January 2018

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MicroRNA‐205–directed transcriptional activation of tumor suppressor genes in prostate cancer

21 January 2018

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Birth of the snoRNPs: the evolution of the modification-guide snoRNAs.

21 January 2018

1 reference

YY1 tethers Xist RNA to the inactive X nucleation center

21 January 2018

1 reference

Genome-wide aberrant DNA methylation of microRNA host genes in hepatocellular carcinoma

21 January 2018

1 reference

DNA methylation and microRNA dysregulation in cancer

21 January 2018

1 reference

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

21 January 2018

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Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

21 January 2018

1 reference

Human DNA methylomes at base resolution show widespread epigenomic differences

21 January 2018

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CpG island density and its correlations with genomic features in mammalian genomes

21 January 2018

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Cytosine methylation prevents binding to DNA of a HeLa cell transcription factor required for optimal expression of the adenovirus major late promoter

21 January 2018

1 reference

Methylation-sensitive binding of transcription factor YY1 to an insulator sequence within the paternally expressed imprinted gene, Peg3.

21 January 2018

1 reference

Regulation of UGT1A1 and HNF1 transcription factor gene expression by DNA methylation in colon cancer cells

21 January 2018

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DNA methylation presents distinct binding sites for human transcription factors

21 January 2018

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On how mammalian transcription factors recognize methylated DNA.

21 January 2018

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MeCP2-mediated transcription repression in the basolateral amygdala may underlie heightened anxiety in a mouse model of Rett syndrome

21 January 2018

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Biochemical analysis of histone deacetylase-independent transcriptional repression by MeCP2

21 January 2018

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Transcriptional repression and heterochromatin formation by MBD1 and MCAF/AM family proteins

21 January 2018

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Regulation of MBD1-mediated transcriptional repression by SUMO and PIAS proteins

21 January 2018

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MBD2 and multiple domains of CHD4 are required for transcriptional repression by Mi-2/NuRD complexes

21 January 2018

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Maintenance of paternal methylation and repression of the imprinted H19 gene requires MBD3

21 January 2018

1 reference

Structural Basis of the Versatile DNA Recognition Ability of the Methyl-CpG Binding Domain of Methyl-CpG Binding Domain Protein 4

21 January 2018

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A profile of methyl-CpG binding domain protein occupancy of hypermethylated promoter CpG islands of tumor suppressor genes in human cancer

21 January 2018

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Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2

21 January 2018

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Duplication of the MECP2 region is a frequent cause of severe mental retardation and progressive neurological symptoms in males

21 January 2018

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MeCP2, a key contributor to neurological disease, activates and represses transcription

21 January 2018

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DNA methylation and transcriptional noise

21 January 2018

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On the presence and role of human gene-body DNA methylation.

21 January 2018

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DNA methylation-dependent chromatin fiber compaction in vivo and in vitro: requirement for linker histone

21 January 2018

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DNA methylation affects nuclear organization, histone modifications, and linker histone binding but not chromatin compaction

21 January 2018

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Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

21 January 2018

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Alteration of genic 5-hydroxymethylcytosine patterning in olfactory neurons correlates with changes in gene expression and cell identity

21 January 2018

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Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells.

21 January 2018

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MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

21 January 2018

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Recombinant human DNA (cytosine-5) methyltransferase. I. Expression, purification, and comparison of de novo and maintenance methylation

21 January 2018

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The Dnmt1 DNA-(cytosine-C5)-methyltransferase methylates DNA processively with high preference for hemimethylated target sites

21 January 2018

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Preferential methylation of unmethylated DNA by Mammalian de novo DNA methyltransferase Dnmt3a.

21 January 2018

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A targeting sequence directs DNA methyltransferase to sites of DNA replication in mammalian nuclei

21 January 2018

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Dynamics of Dnmt1 interaction with the replication machinery and its role in postreplicative maintenance of DNA methylation

21 January 2018

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UHRF1 plays a role in maintaining DNA methylation in mammalian cells

21 January 2018

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Structure of DNMT1-DNA Complex Reveals a Role for Autoinhibition in Maintenance DNA Methylation

21 January 2018

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The replication focus targeting sequence (RFTS) domain is a DNA-competitive inhibitor of Dnmt1

21 January 2018

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The DNA methyltransferase Dnmt1 directly interacts with the SET and RING finger-associated (SRA) domain of the multifunctional protein Uhrf1 to facilitate accession of the catalytic center to hemi-methylated DNA.

21 January 2018

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Mutations in DNMT1 cause hereditary sensory neuropathy with dementia and hearing loss

21 January 2018

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Mutations in DNMT1 cause autosomal dominant cerebellar ataxia, deafness and narcolepsy

21 January 2018

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Novel mutation in the replication focus targeting sequence domain of DNMT1 causes hereditary sensory and autonomic neuropathy IE.

21 January 2018

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Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

21 January 2018

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Dnmt1 deficiency leads to enhanced microsatellite instability in mouse embryonic stem cells

21 January 2018

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DNA hypomethylation restricted to the murine forebrain induces cortical degeneration and impairs postnatal neuronal maturation

21 January 2018

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Dnmt1 overexpression causes genomic hypermethylation, loss of imprinting, and embryonic lethality

21 January 2018

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Physical activity and breast cancer survival: an epigenetic link through reduced methylation of a tumor suppressor gene L3MBTL1.

21 January 2018

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Epigenetic inactivation of the tumor suppressor gene RIZ1 in hepatocellular carcinoma involves both DNA methylation and histone modifications

21 January 2018

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CpG methylation is maintained in human cancer cells lacking DNMT1.

21 January 2018

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Identification of DNMT1 (DNA methyltransferase 1) hypomorphs in somatic knockouts suggests an essential role for DNMT1 in cell survival

21 January 2018

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DNMT1 is required to maintain CpG methylation and aberrant gene silencing in human cancer cells

21 January 2018

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RNA interference-mediated knockdown of DNA methyltransferase 1 leads to promoter demethylation and gene re-expression in human lung and breast cancer cells

21 January 2018

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Complete inactivation of DNMT1 leads to mitotic catastrophe in human cancer cells

21 January 2018

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Haploinsufficiency of Dnmt1 impairs leukemia stem cell function through derepression of bivalent chromatin domains

21 January 2018

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Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

21 January 2018

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Dynamic reprogramming of DNA methylation in the early mouse embryo.

21 January 2018

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Cellular dynamics associated with the genome-wide epigenetic reprogramming in migrating primordial germ cells in mice.

21 January 2018

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DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

21 January 2018

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De novo DNA methylation by Dnmt3a and Dnmt3b is dispensable for nuclear reprogramming of somatic cells to a pluripotent state

21 January 2018

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Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting

21 January 2018

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Rethinking how DNA methylation patterns are maintained

21 January 2018

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Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells.

21 January 2018

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Lsh, chromatin remodeling family member, modulates genome-wide cytosine methylation patterns at nonrepeat sequences

21 January 2018

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In vivo control of CpG and non-CpG DNA methylation by DNA methyltransferases

21 January 2018

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Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons.

21 January 2018

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Co-operation and communication between the human maintenance and de novo DNA (cytosine-5) methyltransferases

21 January 2018

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Active DNA demethylation by Gadd45 and DNA repair

21 January 2018

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Active DNA demethylation mediated by DNA glycosylases

21 January 2018

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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

21 January 2018

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Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

21 January 2018

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Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

21 January 2018

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Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine

21 January 2018

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Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development

21 January 2018

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

21 January 2018

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A six months exercise intervention influences the genome-wide DNA methylation pattern in human adipose tissue

21 January 2018

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Arginine methylation at a glance

21 January 2018

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H3K4 tri-methylation provides an epigenetic signature of active enhancers

21 January 2018

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Histone H3K27 trimethylation inhibits H3 binding and function of SET1-like H3K4 methyltransferase complexes

21 January 2018

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EZH1 and EZH2 cogovern histone H3K27 trimethylation and are essential for hair follicle homeostasis and wound repair

21 January 2018

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H3K36 methylation antagonizes PRC2-mediated H3K27 methylation

21 January 2018

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Chromatin 'resetting' during transcription elongation: a central role for methylated H3K36.

21 January 2018

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High-resolution profiling of histone methylations in the human genome

21 January 2018

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Histone H3 lysine 56 methylation regulates DNA replication through its interaction with PCNA

21 January 2018

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JMJD6 is a histone arginine demethylase

21 January 2018

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UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development

21 January 2018

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Crx activates opsin transcription by recruiting HAT-containing co-activators and promoting histone acetylation

21 January 2018

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von Hippel-Lindau partner Jade-1 is a transcriptional co-activator associated with histone acetyltransferase activity.

21 January 2018

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The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men

21 January 2018

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Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.

21 January 2018

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Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes

21 January 2018

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Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster

21 January 2018

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Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

21 January 2018

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H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction

21 January 2018

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DNA double-strand breaks in heterochromatin elicit fast repair protein recruitment, histone H2AX phosphorylation and relocation to euchromatin

21 January 2018

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Role of ATM and the damage response mediator proteins 53BP1 and MDC1 in the maintenance of G(2)/M checkpoint arrest

21 January 2018

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WSTF regulates the H2A.X DNA damage response via a novel tyrosine kinase activity

21 January 2018

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Critical role of monoubiquitination of histone H2AX protein in histone H2AX phosphorylation and DNA damage response

21 January 2018

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Co-mutation of histone H2AX S139A with Y142A rescues Y142A-induced ionising radiation sensitivity.

21 January 2018

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Histone H1 phosphorylation is associated with transcription by RNA polymerases I and II

21 January 2018

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Synergistic coupling of histone H3 phosphorylation and acetylation in response to epidermal growth factor stimulation

21 January 2018

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PKM2 phosphorylates histone H3 and promotes gene transcription and tumorigenesis

21 January 2018

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Visualizing histone modifications in living cells: spatiotemporal dynamics of H3 phosphorylation during interphase

21 January 2018

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Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation

21 January 2018

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Appearance and heterochromatin localization of HP1α in early mouse embryos depends on cytoplasmic clock and H3S10 phosphorylation.

21 January 2018

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Learning how to read ADP-ribosylation

21 January 2018

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Histone H1 poly[ADP]-ribosylation regulates the chromatin alterations required for learning consolidation.

21 January 2018

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Holocarboxylase synthetase is a chromatin protein and interacts directly with histone H3 to mediate biotinylation of K9 and K18

21 January 2018

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Reduced histone biotinylation in multiple carboxylase deficiency patients: a nuclear role for holocarboxylase synthetase

21 January 2018

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Histone H2A mono-ubiquitination is a crucial step to mediate PRC1-dependent repression of developmental genes to maintain ES cell identity

21 January 2018

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Uhrf1-dependent H3K23 ubiquitylation couples maintenance DNA methylation and replication

21 January 2018

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Signals and combinatorial functions of histone modifications

21 January 2018

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Dual-specificity histone demethylase KIAA1718 (KDM7A) regulates neural differentiation through FGF4.

21 January 2018

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Crosstalk between SET7/9-dependent methylation and ARTD1-mediated ADP-ribosylation of histone H1.4.

21 January 2018

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HP1 binds specifically to Lys26-methylated histone H1.4, whereas simultaneous Ser27 phosphorylation blocks HP1 binding

21 January 2018

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Isoform-specific phosphorylation of human linker histone H1.4 in mitosis by the kinase Aurora B.

21 January 2018

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A modified "cross-talk" between histone H2B Lys-120 ubiquitination and H3 Lys-79 methylation.

21 January 2018

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A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability

21 January 2018

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Repression of p53 activity by Smyd2-mediated methylation

21 January 2018

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Control of the hippo pathway by Set7-dependent methylation of Yap.

21 January 2018

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Methylation of SUV39H1 by SET7/9 results in heterochromatin relaxation and genome instability

21 January 2018

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Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes

21 January 2018

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Spreading of X chromosome inactivation via a hierarchy of defined Polycomb stations

21 January 2018

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The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA.

21 January 2018

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Analysis of skewed X-chromosome inactivation in females with rheumatoid arthritis and autoimmune thyroid diseases

21 January 2018

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CRM1 mediates nuclear-cytoplasmic shuttling of mature microRNAs.

21 January 2018

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Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs

21 January 2018

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Human TNRC6A is an Argonaute-navigator protein for microRNA-mediated gene silencing in the nucleus

21 January 2018

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Mouse miRNA-709 directly regulates miRNA-15a/16-1 biogenesis at the posttranscriptional level in the nucleus: evidence for a microRNA hierarchy system

21 January 2018

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Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival

21 January 2018

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MicroRNA miR-21 overexpression in human breast cancer is associated with advanced clinical stage, lymph node metastasis and patient poor prognosis

21 January 2018

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Male germ cells express abundant endogenous siRNAs

21 January 2018

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Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing

21 January 2018

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Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 January 2018

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Methyl-CpG binding domain 1 (MBD1) interacts with the Suv39h1-HP1 heterochromatic complex for DNA methylation-based transcriptional repression

21 January 2018

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Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin

21 January 2018

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Association of UHRF1 with methylated H3K9 directs the maintenance of DNA methylation

21 January 2018

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MicroRNA-143 is downregulated in breast cancer and regulates DNA methyltransferases 3A in breast cancer cells.

21 January 2018

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Ten-eleven translocation (Tet) and thymine DNA glycosylase (TDG), components of the demethylation pathway, are direct targets of miRNA-29a

21 January 2018

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DNMT1-interacting RNAs block gene-specific DNA methylation

21 January 2018

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Epigenetic reprogramming in mouse primordial germ cells

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/IUB.1264

1 reference

Consolidated OpenCitations Corpus – April 2017

release_gcnq7mz5hbf2bkygdkcccnz3si

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/gcnq7mz5hbf2bkygdkcccnz3si

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

Consolidated OpenCitations Corpus – April 2017

PubMed publication ID

24706538

1 reference

Consolidated OpenCitations Corpus – April 2017