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Selected insights from application of whole-genome sequencing for outbreak investigations
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scholarly article
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PubMed
title
Selected insights from application of whole-genome sequencing for outbreak investigations
(English)
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main subject
whole genome sequencing
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based on heuristic
inferred from title
author
Binh An Diep
series ordinal
2
object named as
Binh An Diep
1 reference
stated in
Crossref
author name string
Vien Thi Minh Le
series ordinal
1
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stated in
Crossref
language of work or name
English
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stated in
PubMed
publication date
October 2013
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stated in
PubMed
published in
Current opinion in critical care
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stated in
PubMed
volume
19
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stated in
PubMed
issue
5
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stated in
PubMed
page(s)
432-9
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PubMed
cites work
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PubMed Central
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21 March 2017
Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany
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21 March 2017
Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study
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PubMed Central
reference URL
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21 March 2017
Whole-genome sequencing and social-network analysis of a tuberculosis outbreak
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7 April 2017
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7 April 2017
Pathogenic Escherichia coli
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PubMed Central
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7 April 2017
Whole-genome sequencing to identify transmission of Mycobacterium abscessus between patients with cystic fibrosis: a retrospective cohort study
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28 September 2017
Retrospective analysis of whole genome sequencing compared to prospective typing data in further informing the epidemiological investigation of an outbreak of Shigella sonnei in the UK.
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28 September 2017
Necrotizing cutaneous mucormycosis after a tornado in Joplin, Missouri, in 2011.
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28 September 2017
Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study.
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28 September 2017
Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study
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28 September 2017
Public health value of next-generation DNA sequencing of enterohemorrhagic Escherichia coli isolates from an outbreak.
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28 September 2017
Carbapenemases in Klebsiella pneumoniae and other Enterobacteriaceae: an evolving crisis of global dimensions
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28 September 2017
Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing
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PubMed Central
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28 September 2017
Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak
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28 September 2017
MRSA epidemic linked to a quickly spreading colonization and virulence determinant.
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28 September 2017
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.
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28 September 2017
Genomic anatomy of Escherichia coli O157:H7 outbreaks
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28 September 2017
Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection
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PubMed Central
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28 September 2017
Worldwide Outbreak Database: the largest collection of nosocomial outbreaks
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PubMed Central
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28 September 2017
Clinical practice: colonization, fomites, and virulence: rethinking the pathogenesis of community-associated methicillin-resistant Staphylococcus aureus infection
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28 September 2017
Functional comparison of serine protease autotransporters of enterobacteriaceae
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PubMed Central
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28 September 2017
Identification of an aggregative adhesion fimbria (AAF) type III-encoding operon in enteroaggregative Escherichia coli as a sensitive probe for detecting the AAF-encoding operon family
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28 September 2017
Genome sequence of a recently emerged, highly transmissible, multi-antibiotic- and antiseptic-resistant variant of methicillin-resistant Staphylococcus aureus, sequence type 239 (TW).
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retrieved
31 May 2018
Cholera
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4104273
retrieved
28 November 2018
Identification of a salmonellosis outbreak by means of molecular sequencing.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4104273
retrieved
28 November 2018
Identifiers
DOI
10.1097/MCC.0B013E3283636B8C
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3302415
Fatcat ID
release_im36edaym5htjld54b2mjb4ygu
0 references
OpenCitations bibliographic resource ID
3302415
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3302415
PMC publication ID
4104273
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3302415
PubMed publication ID
23856896
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3302415
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