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The dharma of nonsense-mediated mRNA decay in mammalian cells
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8 September 2019
title
The dharma of nonsense-mediated mRNA decay in mammalian cells
(English)
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main subject
regulation of gene expression
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PubMed
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8 September 2019
author
Lynne E. Maquat
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2
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Lynne E. Maquat
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Maximilian Wei-Lin Popp
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1
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English
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publication date
January 2014
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1 January 2014
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8 September 2019
published in
Molecules and Cells
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PubMed
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PubMed Central
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8 September 2019
volume
37
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PubMed
issue
1
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PubMed
page(s)
1-8
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cites work
Dynamic integration of splicing within gene regulatory pathways
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The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus
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miRNA-mediated gene silencing by translational repression followed by mRNA deadenylation and decay
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Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish
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21 March 2017
Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2
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21 March 2017
Mechanism of escape from nonsense-mediated mRNA decay of human beta-globin transcripts with nonsense mutations in the first exon
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Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay
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SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay
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21 March 2017
Disassembly of exon junction complexes by PYM
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21 March 2017
Human proline-rich nuclear receptor coregulatory protein 2 mediates an interaction between mRNA surveillance machinery and decapping complex
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21 March 2017
SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells
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21 March 2017
SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan
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21 March 2017
A competition between stimulators and antagonists of Upf complex recruitment governs human nonsense-mediated mRNA decay
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21 March 2017
Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay
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21 March 2017
Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways
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PubMed Central
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21 March 2017
Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
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21 March 2017
SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway
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PubMed Central
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21 March 2017
eIF4G is required for the pioneer round of translation in mammalian cells
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21 March 2017
Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7
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PubMed Central
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21 March 2017
Characterization of human Smg5/7a: a protein with similarities to Caenorhabditis elegans SMG5 and SMG7 that functions in the dephosphorylation of Upf1.
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21 March 2017
Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20
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21 March 2017
The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions
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21 March 2017
Identification and characterization of human orthologues to Saccharomyces cerevisiae Upf2 protein and Upf3 protein (Caenorhabditis elegans SMG-4)
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21 March 2017
Pre-mRNA splicing alters mRNP composition: evidence for stable association of proteins at exon-exon junctions
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21 March 2017
The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
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21 March 2017
The molecular basis for the regulation of the cap-binding complex by the importins
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21 March 2017
Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast
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21 March 2017
Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities
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21 March 2017
The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity
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PubMed Central
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21 March 2017
How and where are nonsense mRNAs degraded in mammalian cells?
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21 March 2017
5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II
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PubMed Central
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21 March 2017
Nonsense-mediated mRNA decay in health and disease
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7 April 2017
A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance
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7 April 2017
Temporal and spatial characterization of nonsense-mediated mRNA decay
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28 September 2017
Rules that govern UPF1 binding to mRNA 3' UTRs
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28 September 2017
Alternative splicing: a pivotal step between eukaryotic transcription and translation
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28 September 2017
When a ribosome encounters a premature termination codon
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28 September 2017
Human spliceosomal protein CWC22 plays a role in coupling splicing to exon junction complex deposition and nonsense-mediated decay
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28 September 2017
NMD: a multifaceted response to premature translational termination
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28 September 2017
Evidence that the Upf1-related molecular motor scans the 3'-UTR to ensure mRNA integrity
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28 September 2017
Translation initiation on mRNAs bound by nuclear cap-binding protein complex CBP80/20 requires interaction between CBP80/20-dependent translation initiation factor and eukaryotic translation initiation factor 3g.
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28 September 2017
The spliceosome: a flexible, reversible macromolecular machine
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28 September 2017
Trafficking to uncharted territory of the nuclear envelope
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28 September 2017
Testing the faux-UTR model for NMD: analysis of Upf1p and Pab1p competition for binding to eRF3/Sup35p.
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28 September 2017
Autoregulation of the nonsense-mediated mRNA decay pathway in human cells
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28 September 2017
Interaction of PABPC1 with the translation initiation complex is critical to the NMD resistance of AUG-proximal nonsense mutations.
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28 September 2017
N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD
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28 September 2017
Cap and cap-binding proteins in the control of gene expression
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28 September 2017
RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD.
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28 September 2017
Inhibition of nonsense-mediated RNA decay by the tumor microenvironment promotes tumorigenesis
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28 September 2017
CBP80-promoted mRNP rearrangements during the pioneer round of translation, nonsense-mediated mRNA decay, and thereafter
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PubMed Central
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28 September 2017
Unloading RNAs in the cytoplasm: an "importin" task
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28 September 2017
Upf1 senses 3'UTR length to potentiate mRNA decay
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28 September 2017
NMD: RNA biology meets human genetic medicine
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28 September 2017
The pioneer round of translation: features and functions
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28 September 2017
Nonsense-mediated RNA decay regulation by cellular stress: implications for tumorigenesis.
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28 September 2017
Molecular mechanisms of eukaryotic pre-mRNA 3' end processing regulation
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28 September 2017
Remodeling of the pioneer translation initiation complex involves translation and the karyopherin importin beta
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28 September 2017
The hierarchy of exon-junction complex assembly by the spliceosome explains key features of mammalian nonsense-mediated mRNA decay
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28 September 2017
Execution of nonsense-mediated mRNA decay: what defines a substrate?
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28 September 2017
Alternative splicing resulting in nonsense-mediated mRNA decay: what is the meaning of nonsense?
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28 September 2017
Translation factors promote the formation of two states of the closed-loop mRNP.
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28 September 2017
Posttranscriptional gene regulation by spatial rearrangement of the 3' untranslated region
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28 September 2017
Regulation of multiple core spliceosomal proteins by alternative splicing-coupled nonsense-mediated mRNA decay
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28 September 2017
Does the nonsense-mediated mRNA decay mechanism prevent the synthesis of truncated BRCA1, CHK2, and p53 proteins?
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28 September 2017
Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function
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28 September 2017
Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay
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PubMed Central
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28 September 2017
Dynamic nuclear pore complexes: life on the edge.
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28 September 2017
Transport of messenger RNA from the nucleus to the cytoplasm
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PubMed Central
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28 September 2017
Evidence that poly(A) binding protein C1 binds nuclear pre-mRNA poly(A) tails
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28 September 2017
SMG7 acts as a molecular link between mRNA surveillance and mRNA decay
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PubMed Central
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28 September 2017
Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise
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28 September 2017
SMG-5, required for C.elegans nonsense-mediated mRNA decay, associates with SMG-2 and protein phosphatase 2A.
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28 September 2017
The ends of the affair: capping and polyadenylation.
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28 September 2017
Evidence that translation reinitiation abrogates nonsense-mediated mRNA decay in mammalian cells
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28 September 2017
Nuclear degradation of nonsense mutated beta-globin mRNA: a post-transcriptional mechanism to protect heterozygotes from severe clinical manifestations of beta-thalassemia?
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
28 September 2017
eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
31 May 2018
UPF1 association with the cap-binding protein, CBP80, promotes nonsense-mediated mRNA decay at two distinct steps
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
31 May 2018
Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
31 May 2018
Poly(A) tail length is controlled by the nuclear poly(A)-binding protein regulating the interaction between poly(A) polymerase and the cleavage and polyadenylation specificity factor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
31 May 2018
Nonsense-mediated mRNA decay in yeast does not require PAB1 or a poly(A) tail
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
31 May 2018
Making sense of nonsense
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
28 November 2018
Nonsense-mediated mRNA decay occurs during eIF4F-dependent translation in human cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
28 November 2018
CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
28 November 2018
A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3907001
retrieved
28 November 2018
Translation is required to remove Y14 from mRNAs in the cytoplasm
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24552703
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Translational repression and eIF4A2 activity are critical for microRNA-mediated gene regulation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24552703
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.14348/MOLCELLS.2014.2193
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2272387
OpenCitations bibliographic resource ID
2272387
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2272387
PMC publication ID
3907001
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2272387
PubMed publication ID
24552703
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2272387
ResearchGate publication ID
260269894
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