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Heterogeneity and complexity within the nuclease module of the Ccr4-Not complex
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title
Heterogeneity and complexity within the nuclease module of the Ccr4-Not complex
(English)
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author
Sebastiaan Winkler
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1
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Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
Dario L Balacco
series ordinal
2
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stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
author name string
G. Sebastiaan Winkler
series ordinal
1
1 reference
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Crossref
Dario L. Balacco
series ordinal
2
1 reference
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Crossref
language of work or name
English
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PubMed
publication date
23 December 2013
1 reference
stated in
PubMed
published in
Frontiers in Genetics
2 references
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Crossref
stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
volume
4
2 references
stated in
PubMed
stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
page(s)
296
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PubMed
stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
cites work
NOT10 and C2orf29/NOT11 form a conserved module of the CCR4-NOT complex that docks onto the NOT1 N-terminal domain
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The anti-proliferative activity of BTG/TOB proteins is mediated via the Caf1a (CNOT7) and Caf1b (CNOT8) deadenylase subunits of the Ccr4-not complex
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C2ORF29/CNOT11 and CNOT10 form a new module of the CCR4-NOT complex
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The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex
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miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT
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miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs
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The role of the CNOT1 subunit of the CCR4-NOT complex in mRNA deadenylation and cell viability
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21 March 2017
Anti-proliferative protein Tob negatively regulates CPEB3 target by recruiting Caf1 deadenylase
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CNOT2 depletion disrupts and inhibits the CCR4-NOT deadenylase complex and induces apoptotic cell death
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Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin
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The Ccr4a (CNOT6) and Ccr4b (CNOT6L) deadenylase subunits of the human Ccr4-Not complex contribute to the prevention of cell death and senescence
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The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation
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Interaction of antiproliferative protein Tob with the CCR4-NOT deadenylase complex
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The BTG2 protein is a general activator of mRNA deadenylation
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Human TOB, an antiproliferative transcription factor, is a poly(A)-binding protein-dependent positive regulator of cytoplasmic mRNA deadenylation
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Depletion of mammalian CCR4b deadenylase triggers elevation of the p27Kip1 mRNA level and impairs cell growth
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CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase
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Identification of four families of yCCR4- and Mg2+-dependent endonuclease-related proteins in higher eukaryotes, and characterization of orthologs of yCCR4 with a conserved leucine-rich repeat essential for hCAF1/hPOP2 binding
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Atomic model of human Rcd-1 reveals anarmadillo-like-repeat protein with in vitro nucleic acid binding properties
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The CCR4 and CAF1 proteins of the CCR4-NOT complex are physically and functionally separated from NOT2, NOT4, and NOT5.
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PAN3 encodes a subunit of the Pab1p-dependent poly(A) nuclease in Saccharomyces cerevisiae
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NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization
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The Caenorhabditis elegans GW182 protein AIN-1 interacts with PAB-1 and subunits of the PAN2-PAN3 and CCR4-NOT deadenylase complexes
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Evidence providing new insights into TOB-promoted deadenylation and supporting a link between TOB's deadenylation-enhancing and antiproliferative activities
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The Ccr4--not complex
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Translational repression by deadenylases
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BTG/TOB factors impact deadenylases
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A network of multiple regulatory layers shapes gene expression in fission yeast.
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A complex containing the CCR4 and CAF1 proteins is involved in mRNA deadenylation in Drosophila
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Nocturnin, a deadenylase in Xenopus laevis retina: a mechanism for posttranscriptional control of circadian-related mRNA.
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28 September 2017
DBF2, a cell cycle-regulated protein kinase, is physically and functionally associated with the CCR4 transcriptional regulatory complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 September 2017
mRNA poly(A) tail, a 3' enhancer of translational initiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 September 2017
Molecular analysis of POP2 gene, a gene required for glucose-derepression of gene expression in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 September 2017
The CCR4 protein from Saccharomyces cerevisiae contains a leucine-rich repeat region which is required for its control of ADH2 gene expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 September 2017
Caf1 regulates translocation of ribonucleotide reductase by releasing nucleoplasmic Spd1-Suc22 assembly
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
31 May 2018
The NOT proteins are part of the CCR4 transcriptional complex and affect gene expression both positively and negatively
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
31 May 2018
The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
31 May 2018
The Ccr4-Not deadenylase complex constitutes the main poly(A) removal activity in C. elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 November 2018
Involvement of CNOT3 in mitotic progression through inhibition of MAD1 expression.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 November 2018
Oligo-astheno-teratozoospermia in mice lacking Cnot7, a regulator of retinoid X receptor beta.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 November 2018
Mouse CAF1 can function as a processive deadenylase/3'-5'-exonuclease in vitro but in yeast the deadenylase function of CAF1 is not required for mRNA poly(A) removal
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 November 2018
Systematic mutagenesis of the leucine-rich repeat (LRR) domain of CCR4 reveals specific sites for binding to CAF1 and a separate critical role for the LRR in CCR4 deadenylase activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3870282
retrieved
28 November 2018
Multifunctional deadenylase complexes diversify mRNA control
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24391663
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.3389/FGENE.2013.00296
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3963750
stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
Fatcat ID
release_qlbdfulwtnfnvf2jkn4flhrx4e
0 references
OpenCitations bibliographic resource ID
3963750
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3963750
PMCID
3870282
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3963750
stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
PubMed ID
24391663
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3963750
stated in
Europe PubMed Central
PMCID
3870282
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24391663%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 June 2020
ResearchGate publication ID
259589046
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