(Q27315231)

26 June 2017

title

A survey of the sorghum transcriptome using single-molecule long reads (English)

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26 June 2017

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7

Asa Ben-Hur

1 reference

26 June 2017

Salah E Abdel-Ghany

1

1 reference

26 June 2017

Michael Hamilton

2

1 reference

26 June 2017

Jennifer L Jacobi

3

1 reference

26 June 2017

Peter Ngam

4

1 reference

26 June 2017

Nicholas Devitt

5

1 reference

26 June 2017

Faye Schilkey

6

1 reference

26 June 2017

Anireddy S N Reddy

8

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26 June 2017

language of work or name

English

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publication date

24 June 2016

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26 June 2017

published in

Nature Communications

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26 June 2017

volume

7

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26 June 2017

page(s)

11706

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Creative Commons Attribution 4.0 International

26 June 2017

copyright license

start time

24 June 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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28 September 2017

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28 September 2017

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Poly(A)-tail profiling reveals an embryonic switch in translational control

28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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Whole-genome sequencing reveals untapped genetic potential in Africa's indigenous cereal crop sorghum

28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis

28 September 2017

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28 September 2017

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28 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid

28 September 2017

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Functional consequences of developmentally regulated alternative splicing

28 September 2017

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Transcriptome dynamics through alternative polyadenylation in developmental and environmental responses in plants revealed by deep sequencing.

28 September 2017

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Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

28 September 2017

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Genome-wide mapping of alternative splicing in Arabidopsis thaliana

28 September 2017

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Regulation of alternative splicing of pre-mRNAs by stresses.

28 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Alternative splicing of pre-messenger RNAs in plants in the genomic era.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Evolutionary conservation and regulation of particular alternative splicing events in plant SR proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Genomewide comparative analysis of alternative splicing in plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Ectopic expression of atRSZ33 reveals its function in splicing and causes pleiotropic changes in development.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

The contribution of AAUAAA and the upstream element UUUGUA to the efficiency of mRNA 3'-end formation in plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Genome-wide analysis of alternative splicing landscapes modulated during plant-virus interactions in Brachypodium distachyon.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Full-length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone biosynthesis.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

LoRDEC: accurate and efficient long read error correction.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Discovery and expression analysis of alternative splicing events conserved among plant SR proteins

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Identification of an intronic splicing regulatory element involved in auto-regulation of alternative splicing of SCL33 pre-mRNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Targeted 3' processing of antisense transcripts triggers Arabidopsis FLC chromatin silencing.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

Compilation of mRNA polyadenylation signals in Arabidopsis revealed a new signal element and potential secondary structures.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

FY is an RNA 3' end-processing factor that interacts with FCA to control the Arabidopsis floral transition.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

The Arabidopsis splicing factor SR1 is regulated by alternative splicing.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4931028

28 November 2018

Identifiers

DOI

10.1038/NCOMMS11706

1 reference

Dimensions Publication ID

26 June 2017

0 references

1022255583

0 references

OpenCitations bibliographic resource ID

507548

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

507548

1 reference