(Q27319858)

26 June 2017

title

CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data (English)

1 reference

26 June 2017

Anne E Carpenter

2

0 references

author name string

Mark-Anthony Bray

series ordinal

1

1 reference

26 June 2017

language of work or name

English

0 references

publication date

4 November 2015

1 reference

26 June 2017

1 reference

26 June 2017

volume

16

1 reference

26 June 2017

issue

1

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page(s)

368

1 reference

describes a project that uses

26 June 2017

scikit-learn

object named as

scikit-learn

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

CellProfiler

object named as

CellProfiler

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

CellProfiler

0 references

cites work

A new method to address unmet needs for extracting individual cell migration features from a large number of cells embedded in 3D volumes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

A semi-local neighborhood-based framework for probabilistic cell lineage tracing

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Methods for cell and particle tracking

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Robust single-particle tracking in live-cell time-lapse sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Cell-intrinsic adaptation of lipid composition to local crowding drives social behaviour

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Visualization and correction of automated segmentation, tracking and lineaging from 5-D stem cell image sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Nanoparticle vesicle encoding for imaging and tracking cell populations

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data

28 September 2017

1 reference

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A benchmark for comparison of cell tracking algorithms

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Objective comparison of particle tracking methods

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Unsupervised automated high throughput phenotyping of RNAi time-lapse movies

28 September 2017

1 reference

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Vertebrate neural stem cell segmentation, tracking and lineaging with validation and editing

28 September 2017

1 reference

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Measurement of single-cell dynamics.

28 September 2017

1 reference

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Automated tracking of stem cell lineages of Arabidopsis shoot apex using local graph matching

28 September 2017

1 reference

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In toto imaging of embryogenesis with confocal time-lapse microscopy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

CellProfiler Analyst: data exploration and analysis software for complex image-based screens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Automated 5-D analysis of cell migration and interaction in the thymic cortex from time-lapse sequences of 3-D multi-channel multi-photon images

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Cell population tracking and lineage construction with spatiotemporal context

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Time-resolved analysis and visualization of dynamic processes in living cells

28 September 2017

1 reference

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Extensible visualization and analysis for multidimensional images using Vaa3D.

28 September 2017

1 reference

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Computational image analysis of cellular dynamics: a case study based on particle tracking

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4634901

Automated cell lineage construction: a rapid method to analyze clonal development established with murine neural progenitor cells.

31 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-015-0759-X

The lineaging of fluorescently-labeled Caenorhabditis elegans embryos with StarryNite and AceTree.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-015-0759-X

Graphical model for joint segmentation and tracking of multiple dividing cells

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-015-0759-X

10.1186/S12859-015-0759-X

21 January 2018

Identifiers

DOI

1 reference

26 June 2017

DBLP publication ID

journals/bmcbi/BrayC15

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1047829452

0 references

OpenCitations bibliographic resource ID

4745246

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4745246

1 reference