(Q27472977)

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Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

viral persistence

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1

object named as

Peter Simmonds

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

object named as

Andrew Tuplin

2

0 references

object named as

David J Evans

3

0 references

language of work or name

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publication date

23 July 2004

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

1337-1351

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Thermodynamic and phylogenetic prediction of RNA secondary structures in the coding region of hepatitis C virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Intracellular vs extracellular recognition of pathogens--common concepts in mammals and flies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Identification of a cis-acting replication element within the poliovirus coding region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Structural constraints on RNA virus evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

RNA-protein interactions in regulation of picornavirus RNA translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Internal ribosome entry site within hepatitis C virus RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

21 March 2017

Single-stranded antisense siRNAs guide target RNA cleavage in RNAi

1 reference

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21 March 2017

Viruses and interferon: a fight for supremacy

1 reference

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21 March 2017

Structure, function, and evolution of adenovirus virus-associated RNAs

1 reference

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21 March 2017

On finding all suboptimal foldings of an RNA molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

7 April 2017

Regulation of Interferon Regulatory Factor-3 by the Hepatitis C Virus Serine Protease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

7 April 2017

Interferons: cell signalling, immune modulation, antiviral response and virus countermeasures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

7 April 2017

Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

7 April 2017

Widespread selection for local RNA secondary structure in coding regions of bacterial genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

The dsRNA binding protein family: critical roles, diverse cellular functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

Virulence and pathogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

Conserved RNA secondary structures in Picornaviridae genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

The rest is silence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

How hepatitis C virus counteracts the interferon response: the jury is still out on NS5A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

Evolution of cell recognition by viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

The virus battles: IFN induction of the antiviral state and mechanisms of viral evasion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

The evolution of RNA viruses: A population genetics view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

Reverse genetics of picornaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

The 2-5A system: modulation of viral and cellular processes through acceleration of RNA degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

29 September 2017

Comparative analysis of the regulation of the interferon-inducible protein kinase PKR by Epstein-Barr virus RNAs EBER-1 and EBER-2 and adenovirus VAI RNA

1 reference

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29 September 2017

The 3' untranslated region of picornavirus RNA: features required for efficient genome replication.

1 reference

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29 September 2017

Inhibitory activity for the interferon-induced protein kinase is associated with the reovirus serotype 1 sigma 3 protein

1 reference

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29 September 2017

Tat-responsive region RNA of human immunodeficiency virus 1 can prevent activation of the double-stranded-RNA-activated protein kinase

1 reference

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29 September 2017

The Brome mosaic virus subgenomic promoter hairpin is structurally similar to the iron-responsive element and functionally equivalent to the minus-strand core promoter stem-loop C.

1 reference

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2 June 2018

African origin of GB virus C/hepatitis G virus

1 reference

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2 June 2018

The Double-Stranded RNA-Dependent Protein Kinase PKR: Structure and Function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

2 June 2018

Multiple secondary structure rearrangements during HIV-1 RNA dimerization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

27 November 2018

Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370621

27 November 2018

Hepatitis C viraemia in recipients of Irish intravenous anti-D immunoglobulin

1 reference

https://pubmed.ncbi.nlm.nih.gov/15273323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dinucleotide and stop codon frequencies in single-stranded RNA viruses

1 reference

https://pubmed.ncbi.nlm.nih.gov/15273323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1261/RNA.7640104

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

release_wpkxkm7vw5e7bbpuvggkfqab6a

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

ResearchGate publication ID

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