(Q27496480)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

5 December 2024

1

Leslie Regad

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

5 December 2024

2

Juliette Martin

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

5 December 2024

3

Anne-Claude Camproux

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

5 December 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=21689388

full work available at URL

5 December 2024

publication date

20 June 2011

0 references

https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-247

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

https://europepmc.org/articles/PMC3158783

5 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

https://europepmc.org/articles/PMC3158783?pdf=render

5 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21689388

https://link.springer.com/content/pdf/10.1186/1471-2105-12-247.pdf

5 December 2024

1 reference

10.1186/1471-2105-12-247

https://api.crossref.org/works/10.1186/1471-2105-12-247

5 December 2024

0 references

12

0 references

issue

1

0 references

page(s)

247

0 references

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20 March 2017

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20 March 2017

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20 March 2017

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The P-loop--a common motif in ATP- and GTP-binding proteins

20 March 2017

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Discovering protein secondary structures: classification and description of isolated alpha-turns

20 March 2017

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Omega loops: nonregular secondary structures significant in protein function and stability

20 March 2017

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Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units

20 March 2017

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Chain reversals in proteins

20 March 2017

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FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures

20 March 2017

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Discovering protein secondary structures: Classification and description of isolated α-turns

7 April 2017

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The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

22 April 2017

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PISCES: a protein sequence culling server

7 April 2017

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A structural-alphabet-based strategy for finding structural motifs across protein families.

7 April 2017

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Exact distribution of a pattern in a set of random sequences generated by a Markov source: applications to biological data

29 September 2017

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Mining protein loops using a structural alphabet and statistical exceptionality

29 September 2017

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A novel main chain motif in proteins bridged by cationic groups: the niche

29 September 2017

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Local function conservation in sequence and structure space

29 September 2017

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Functionally important segments in proteins dissected using Gene Ontology and geometric clustering of peptide fragments.

29 September 2017

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Robust recognition of zinc binding sites in proteins.

29 September 2017

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Automatic generation of 3D motifs for classification of protein binding sites.

29 September 2017

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LFM-Pro: a tool for detecting significant local structural sites in proteins.

29 September 2017

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Numerical solutions for patterns statistics on Markov chains

29 September 2017

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Kinetics and thermodynamics of type VIII beta-turn formation: a CD, NMR, and microsecond explicit molecular dynamics study of the GDNP tetrapeptide

29 September 2017

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Structural analysis of leucine-rich-repeat variants in proteins associated with human diseases

29 September 2017

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Mapping PDB chains to UniProtKB entries.

29 September 2017

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Predicting metal-binding site residues in low-resolution structural models.

29 September 2017

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A hidden markov model derived structural alphabet for proteins.

29 September 2017

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Clustering of protein structural fragments reveals modular building block approach of nature.

29 September 2017

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A novel main-chain anion-binding site in proteins: the nest. A particular combination of phi,psi values in successive residues gives rise to anion-binding sites that occur commonly and are found often at functionally important regions

29 September 2017

1 reference

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Statistical analysis of yeast genomic downstream sequences reveals putative polyadenylation signals

29 September 2017

1 reference

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Hidden Markov model approach for identifying the modular framework of the protein backbone.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Oligonucleotide bias in Bacillus subtilis: general trends and taxonomic comparisons

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Conformational analysis and clustering of short and medium size loops connecting regular secondary structures: a database for modeling and prediction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Over- and underrepresentation of short DNA words in herpesvirus genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Characterizing the microenvironment surrounding protein sites

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Alpha-lactalbumin possesses a novel calcium binding loop.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Statistical analyses of counts and distributions of restriction sites in DNA sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

An automated classification of the structure of protein loops.

29 September 2017

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure

21 January 2018

1 reference

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New efficient statistical sequence-dependent structure prediction of short to medium-sized protein loops based on an exhaustive loop classification

21 January 2018

1 reference

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Classification of common functional loops of kinase super-families

21 January 2018

1 reference

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The Eleventh Datta Lecture. The structural basis for substrate recognition and control by protein kinases

21 January 2018

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Three-dimensional view of the surface motif associated with the P-loop structure: cis and trans cases of convergent evolution.

21 January 2018

1 reference

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Identification of function-associated loop motifs and application to protein function prediction

21 January 2018

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The RNA polymerase factory: a robotic in vitro assembly platform for high-throughput production of recombinant protein complexes

21 January 2018

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Automated discovery of 3D motifs for protein function annotation

21 January 2018

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Predicting small ligand binding sites in proteins using backbone structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

S-SPatt: simple statistics for patterns on Markov chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

High accuracy prediction of beta-turns and their types using propensities and multiple alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

Homology-based method for identification of protein repeats using statistical significance estimates

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

Sites for phosphates and iron-sulfur thiolates in the first membranes: 3 to 6 residue anion-binding motifs (nests).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

The DxDxDG motif for calcium binding: multiple structural contexts and implications for evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-247

Conversion of type I 4:6 to 3:5 beta-turn types in human acidic fibroblast growth factor: effects upon structure, stability, folding, and mitogenic function.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158783

Structural diversity of leucine-rich repeat proteins

27 November 2018

1 reference

12 December 2020

Identification of the Chi site of Haemophilus influenzae as several sequences related to the Escherichia coli Chi site

1 reference

12 December 2020

Protein loops on structurally similar scaffolds: database and conformational analysis

1 reference

12 December 2020

Flexibility of metal binding sites in proteins on a database scale

1 reference

12 December 2020

One type of gamma-turn, rather than the other gives rise to chain-reversal in proteins

1 reference

12 December 2020

Journal of Molecular Biology

19

247

536

AG Murzin

1995

1 reference

DOI

10.1186/1471-2105-12-247

https://api.crossref.org/works/10.1186/1471-2105-12-247

5 December 2024

Identifiers

DOI

10.1186/1471-2105-12-247

0 references

DBLP publication ID

journals/bmcbi/RegadMC11

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1016518355

0 references

PMC publication ID

3158783

0 references