(Q27677873)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Large terminase conformational change induced by connector binding in bacteriophage T7 (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

0 references

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

Jaime Martín Benito Romero

29 February 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

José María Valpuesta

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

6

José L Carrascosa

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

author name string

Juan C Sánchez-Ferrero

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Mar Pulido-Cid

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

language of work or name

English

0 references

publication date

30 April 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

29 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

volume

288

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

issue

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

page(s)

16998-17007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity

29 February 2020

cites work

1 reference

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Small Terminase Couples Viral DNA Binding to Genome-Packaging ATPase Activity

20 March 2017

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Structure of P22 Headful Packaging Nuclease

20 March 2017

1 reference

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Structural basis for DNA recognition and loading into a viral packaging motor

20 March 2017

1 reference

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Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages

20 March 2017

1 reference

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Molecular Rearrangements Involved in the Capsid Shell Maturation of Bacteriophage T7

20 March 2017

1 reference

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Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain

20 March 2017

1 reference

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Structural basis for the nuclease activity of a bacteriophage large terminase

20 March 2017

1 reference

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The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces

20 March 2017

1 reference

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The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids

20 March 2017

1 reference

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UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

20 March 2017

1 reference

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The HHpred interactive server for protein homology detection and structure prediction

20 March 2017

1 reference

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Structure and polymorphism of the UL6 portal protein of herpes simplex virus type 1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Negative staining and image classification — powerful tools in modern electron microscopy

20 March 2017

1 reference

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Insights into specific DNA recognition during the assembly of a viral genome packaging machine

20 March 2017

1 reference

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Detailed architecture of a DNA translocating machine: the high-resolution structure of the bacteriophage phi29 connector particle

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Structure of the bacteriophage phi29 DNA packaging motor

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

B-DNA at atomic resolution reveals extended hydration patterns

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

UCSF Chimera--a visualization system for exploratory research and analysis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

EMAN: semiautomated software for high-resolution single-particle reconstructions

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

The bacteriophage straight phi29 portal motor can package DNA against a large internal force

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Experimental test of connector rotation during DNA packaging into bacteriophage phi29 capsids

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Herpesvirus assembly: a tale of two membranes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Energy transduction in the F1 motor of ATP synthase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

AAA+ proteins: have engine, will work

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Situs: A package for docking crystal structures into low-resolution maps from electron microscopy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Portal-large terminase interactions of the bacteriophage T4 DNA packaging machine implicate a molecular lever mechanism for coupling ATPase to DNA translocation

7 April 2017

1 reference

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Viral connectors for DNA encapsulation

29 September 2017

1 reference

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The DNA-packaging nanomotor of tailed bacteriophages

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

A clustering approach to multireference alignment of single-particle projections in electron microscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Substrate interactions and promiscuity in a viral DNA packaging motor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Intersubunit coordination in a homomeric ring ATPase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Assembly architecture and DNA binding of the bacteriophage P22 terminase small subunit

29 September 2017

1 reference

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The bacteriophage DNA packaging motor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Measurements of single DNA molecule packaging dynamics in bacteriophage lambda reveal high forces, high motor processivity, and capsid transformations.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Portal motor velocity and internal force resisting viral DNA packaging in bacteriophage phi29.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

What does structure tell us about virus evolution?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Maturation of phage T7 involves structural modification of both shell and inner core components

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

XMIPP: a new generation of an open-source image processing package for electron microscopy.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Atomic snapshots of an RNA packaging motor reveal conformational changes linking ATP hydrolysis to RNA translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Chemomechanical coupling in F1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Molecular mechanisms in bacteriophage T7 procapsid assembly, maturation, and DNA containment.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Structure of a viral DNA gatekeeper at 10 A resolution by cryo-electron microscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Reverse engineering a protein: the mechanochemistry of ATP synthase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Analysis of functional domains of the packaging proteins of bacteriophage T3 by site-directed mutagenesis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Structure of viral connectors and their function in bacteriophage assembly and DNA packaging

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Dissection of functional domains of the packaging protein of bacteriophage T3 by site-directed mutagenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Symmetry mismatch and DNA packaging in large bacteriophages

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

GraFix: sample preparation for single-particle electron cryomicroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Quasi-atomic model of bacteriophage t7 procapsid shell: insights into the structure and evolution of a basic fold.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Fast maximum-likelihood refinement of electron microscopy images

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Structure of the connector of bacteriophage T7 at 8A resolution: structural homologies of a basic component of a DNA translocating machinery

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Defining the ATPase center of bacteriophage T4 DNA packaging machine: requirement for a catalytic glutamate residue in the large terminase protein gp17.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Characterization of the bacteriophage T3 DNA packaging reaction in vitro in a defined system.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Mechanism of force generation of a viral DNA packaging motor

19 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Portal fusion protein constraints on function in DNA packaging of bacteriophage T4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Sharpening high resolution information in single particle electron cryomicroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Subunit conformations and assembly states of a DNA-translocating motor: the terminase of bacteriophage P22.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Disentangling conformational states of macromolecules in 3D-EM through likelihood optimization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Structure of the 13-fold symmetric portal protein of bacteriophage SPP1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Xmipp: An Image Processing Package for Electron Microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric FtsK

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.448951

Characterization of ATPase activity of a defined in vitro system for packaging of bacteriophage T3 DNA

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3675631

Mutations affecting the high affinity ATPase center of gpA, the large subunit of bacteriophage lambda terminase, inactivate the endonuclease activity of terminase

27 November 2018

1 reference

12 December 2020

DNA packaging ATPase of bacteriophage T3

1 reference

12 December 2020

Analysis of interactions among factors involved in the bacteriophage T3 DNA packaging reaction in a defined in vitro system

1 reference

12 December 2020

A study in evolution: the DNA base sequence homology between coliphages T7 and T3

1 reference

12 December 2020

Biochemical characterization of an ATPase activity associated with the large packaging subunit gp17 from bacteriophage T4

1 reference

12 December 2020

Prohead and DNA-gp3-dependent ATPase activity of the DNA packaging protein gp16 of bacteriophage phi 29

1 reference

12 December 2020

Stepwise motion of a microcantilever driven by the hydrolysis of viral ATPases

1 reference

12 December 2020

Structural Analysis of the Bacteriophage T3 Head-to-Tail Connector

1 reference

12 December 2020

An ATP hydrolysis sensor in the DNA packaging motor from bacteriophage T4 suggests an inchworm-type translocation mechanism

1 reference

12 December 2020

A bacteriophage T4 DNA packaging related DNA-dependent ATPase-endonuclease

1 reference

12 December 2020

Overproduction and purification of the products of bacteriophage T3 genes 18 and 19, two genes involved in DNA packaging

1 reference

12 December 2020

Early events in DNA packaging in a defined in vitro system of bacteriophage T3

1 reference

12 December 2020

A defined in vitro system for packaging of bacteriophage T3 DNA

1 reference

12 December 2020

Analysis of the fine structure of the prohead binding domain of the packaging protein of bacteriophage T3 using a hexapeptide, an analog of a prohead binding site

1 reference

12 December 2020

Modulation of the viral ATPase activity by the portal protein correlates with DNA packaging efficiency

1 reference

12 December 2020

Functional analysis of the terminase large subunit, G2P, of Bacillus subtilis bacteriophage SPP1

1 reference

12 December 2020

Structural and functional domains of the large subunit of the bacteriophage T3 DNA packaging enzyme: importance of the C-terminal region in prohead binding

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M112.448951

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23632014%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

23632014

1 reference