(Q27678251)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

title

Rationalization and design of the complementarity determining region sequences in an antibody-antigen recognition interface (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

1 reference

6

1 reference

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27 January 2020

author name string

Chung-Ming Yu

1

1 reference

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27 January 2020

Hung-Pin Peng

2

1 reference

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27 January 2020

Ing-Chien Chen

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Yu-Ching Lee

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Jun-Bo Chen

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Ching-Tai Chen

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Jeng-Yih Chang

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Ei-Wen Yang

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Po-Chiang Hsu

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Jhih-Wei Jian

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Hung-Ju Hsu

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Hung-Ju Chang

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Wen-Lian Hsu

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Kai-Fa Huang

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

Alex Che Ma

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

An-Suei Yang

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

language of work or name

English

0 references

publication date

22 March 2012

1 reference

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27 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

page(s)

e33340

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

27 January 2020

copyright license

start time

22 March 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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20 March 2017

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20 March 2017

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Optimal description of a protein structure in terms of multiple groups undergoing TLS motion

20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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Main-chain bond lengths and bond angles in protein structures

20 March 2017

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A hot spot of binding energy in a hormone-receptor interface

20 March 2017

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Assessing the accuracy of prediction algorithms for classification: an overview

7 April 2017

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The penultimate rotamer library

7 April 2017

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Anatomy of hot spots in protein interfaces

7 April 2017

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High affinity, developability and functional size: the holy grail of combinatorial antibody library generation.

7 April 2017

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OptCDR: a general computational method for the design of antibody complementarity determining regions for targeted epitope binding.

29 September 2017

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Signal sequence as a determinant in expressing disulfide-stabilized single chain antibody variable fragments (sc-dsFv) against human VEGF.

29 September 2017

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Strategies and challenges for the next generation of therapeutic antibodies

29 September 2017

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Antibodies in single-chain format against tumour-associated antigens: present and future applications.

29 September 2017

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Engineering anti-vascular endothelial growth factor single chain disulfide-stabilized antibody variable fragments (sc-dsFv) with phage-displayed sc-dsFv libraries

29 September 2017

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Computer-aided design of functional protein interactions

29 September 2017

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Computational design of affinity and specificity at protein-protein interfaces

29 September 2017

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Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules

29 September 2017

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Design of protein-interaction specificity gives selective bZIP-binding peptides.

29 September 2017

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29 September 2017

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Submitting antibodies to binding arbitration

29 September 2017

1 reference

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Computational design of antibody-affinity improvement beyond in vivo maturation

29 September 2017

1 reference

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Hot spots--a review of the protein-protein interface determinant amino-acid residues

29 September 2017

1 reference

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Potential energy functions for protein design.

29 September 2017

1 reference

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Assessing computational amino acid beta-turn propensities with a phage-displayed combinatorial library and directed evolution

29 September 2017

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Affinity enhancement of an in vivo matured therapeutic antibody using structure-based computational design

29 September 2017

1 reference

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Water structure and interactions with protein surfaces

29 September 2017

1 reference

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Structure-function studies of two synthetic anti-vascular endothelial growth factor Fabs and comparison with the Avastin Fab.

29 September 2017

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Electrostatics in computational protein design

29 September 2017

1 reference

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Progress in modeling of protein structures and interactions

29 September 2017

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A "solvated rotamer" approach to modeling water-mediated hydrogen bonds at protein-protein interfaces

29 September 2017

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Synthetic antibodies from a four-amino-acid code: a dominant role for tyrosine in antigen recognition

29 September 2017

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Exploring the origins of binding specificity through the computational redesign of calmodulin

29 September 2017

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Local structure prediction with local structure-based sequence profiles.

29 September 2017

1 reference

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Local structure-based sequence profile database for local and global protein structure predictions.

29 September 2017

1 reference

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Knowledge-based potential functions in protein design.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3310866

An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3310866

An integrated approach to the analysis and modeling of protein sequences and structures. II. On the relationship between sequence and structural similarity for proteins that are not obviously related in sequence.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3310866

Development trends for therapeutic antibody fragments

29 September 2017

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

A knowledge-based forcefield for protein-protein interface design.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

Computational design of a new hydrogen bond network and at least a 300-fold specificity switch at a protein-protein interface

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

Role of water mediated interactions in protein-protein recognition landscapes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

Construction and purification of a covalently linked divalent tandem single-chain Fv antibody against placental alkaline phosphatase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

X-SITE: use of empirically derived atomic packing preferences to identify favourable interaction regions in the binding sites of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

A simple definition of structural regions in proteins and its use in analyzing interface evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0033340

Displaying the information contents of structural RNA alignments: the structure logos.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3310866

Hydration of protein-protein interfaces

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22457753

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0033340

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

ADS bibcode

2012PLoSO...733340Y

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

PubMed publication ID

22457753

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22457753%20AND%20SRC:MED&resulttype=core&format=json