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The cotranscriptional assembly of snoRNPs controls the biosynthesis of H/ACA snoRNAs in Saccharomyces cerevisiae
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PubMed
PubMed ID
15964797
retrieved
1 December 2016
title
The cotranscriptional assembly of snoRNPs controls the biosynthesis of H/ACA snoRNAs in Saccharomyces cerevisiae
(English)
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PubMed
PubMed ID
15964797
retrieved
1 December 2016
main subject
cell biology
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Saccharomyces cerevisiae
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Pseudouridine synthase CBF5 YLR175W
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stated in
GOA release 2020-03-11
author
Alessandro Fatica
series ordinal
4
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Irene Bozzoni
series ordinal
5
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Mariangela Morlando
series ordinal
2
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Monica Ballarino
object named as
Monica Ballarino
series ordinal
1
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author name string
Francesca Pagano
series ordinal
3
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language of work or name
English
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publication date
July 2005
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published in
Molecular and Cellular Biology
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stated in
PubMed
PubMed ID
15964797
retrieved
1 December 2016
volume
25
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page(s)
5396-403
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issue
13
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describes a project that uses
ImageQuant
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Europe PubMed Central
retrieved
11 June 2022
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1156983/fullTextXML
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20 March 2017
Coupling between snoRNP assembly and 3' processing controls box C/D snoRNA biosynthesis in yeast
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PubMed Central
reference URL
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20 March 2017
Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins
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20 March 2017
Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends
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20 March 2017
Pti1p and Ref2p found in association with the mRNA 3' end formation complex direct snoRNA maturation
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PubMed Central
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20 March 2017
Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast
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Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins
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20 March 2017
Naf1 p is a box H/ACA snoRNP assembly factor
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PubMed Central
reference URL
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20 March 2017
Immunopurified small nucleolar ribonucleoprotein particles pseudouridylate rRNA independently of their association with phosphorylated Nopp140.
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20 March 2017
Naf1p, an essential nucleoplasmic factor specifically required for accumulation of box H/ACA small nucleolar RNPs
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PubMed Central
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20 March 2017
The Shq1p.Naf1p complex is required for box H/ACA small nucleolar ribonucleoprotein particle biogenesis
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PubMed Central
reference URL
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20 March 2017
Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro
1 reference
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PubMed Central
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20 March 2017
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
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PubMed Central
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20 March 2017
Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme
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20 March 2017
Release of U18 snoRNA from its host intron requires interaction of Nop1p with the Rnt1p endonuclease.
1 reference
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PubMed Central
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20 March 2017
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
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PubMed Central
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20 March 2017
A comprehensive two-hybrid analysis to explore the yeast protein interactome
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20 March 2017
A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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20 March 2017
Synthesis and assembly of the box C+D small nucleolar RNPs
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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20 March 2017
A generic protein purification method for protein complex characterization and proteome exploration
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PubMed Central
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20 March 2017
Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
20 March 2017
Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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20 March 2017
Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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20 March 2017
The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
CTD kinase large subunit is encoded by CTK1, a gene required for normal growth of Saccharomyces cerevisiae
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PubMed Central
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20 March 2017
A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae
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PubMed Central
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20 March 2017
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
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20 March 2017
Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions
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20 March 2017
Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain
1 reference
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PubMed Central
reference URL
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20 March 2017
Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs
1 reference
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PubMed Central
reference URL
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20 March 2017
The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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20 March 2017
Integrating mRNA processing with transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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20 March 2017
Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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7 April 2017
Biogenesis of small nucleolar ribonucleoproteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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7 April 2017
Dynamic association of capping enzymes with transcribing RNA polymerase II
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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7 April 2017
RNA polymerase II and the integration of nuclear events
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
7 April 2017
Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
7 April 2017
A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
7 April 2017
Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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7 April 2017
Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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7 April 2017
Expanding the functional repertoire of CTD kinase I and RNA polymerase II: novel phosphoCTD-associating proteins in the yeast proteome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
Cbf5p, the putative pseudouridine synthase of H/ACA-type snoRNPs, can form a complex with Gar1p and Nop10p in absence of Nhp2p and box H/ACA snoRNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
On the importance of being co-transcriptional
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
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29 September 2017
Small Nucleolar RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
Stable expression in yeast of the mature form of human telomerase RNA depends on its association with the box H/ACA small nucleolar RNP proteins Cbf5p, Nhp2p and Nop10p
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
The ends of the affair: capping and polyadenylation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
A small nucleolar RNP protein is required for pseudouridylation of eukaryotic ribosomal RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
An essential yeast protein, CBF5p, binds in vitro to centromeres and microtubules
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
Tails of RNA polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
29 September 2017
Using chromatin immunoprecipitation to map cotranscriptional mRNA processing in Saccharomyces cerevisiae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
27 November 2018
Construction and analysis of yeast RNA polymerase II CTD deletion and substitution mutations.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1156983
retrieved
27 November 2018
Identifiers
DOI
10.1128/MCB.25.13.5396-5403.2005
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529533
Fatcat ID
release_yug3wsvtjfhhtpvc3bbyokumt4
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/yug3wsvtjfhhtpvc3bbyokumt4
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
OpenCitations bibliographic resource ID
3529533
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529533
PMCID
1156983
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529533
PubMed ID
15964797
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529533
ResearchGate publication ID
7778205
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