(Q27938848)

1 December 2016

title

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA. (English)

1 reference

Dyskerin pseudouridine synthase 1

PubMed publication ID

1 December 2016

0 references

1 reference

pseudouridine synthase activity

1 reference

Pseudouridine synthase PUS9 YDL036C

1 reference

Pseudouridine synthase PUS1 YPL212C

1 reference

Pseudouridine synthase PUS5 YLR165C

1 reference

Pseudouridine synthase PUS7 YOR243C

1 reference

Pseudouridine synthase CBF5 YLR175W

1 reference

Pseudouridine synthase PUS4 YNL292W

1 reference

author

Aviv Regev

12

0 references

Eric Lander

10

0 references

Rahul Satija

9

Rahul Satija

0 references

Schraga Schwartz

1

Schraga Schwartz

0 references

Maxwell R Mumbach

Maxwell R Mumbach

3

0 references

Mitchell Guttman

8

Mitchell Guttman

0 references

Jesse Engreitz

7

Jesse M Engreitz

0 references

author name string

Douglas A Bernstein

2

0 references

Marko Jovanovic

4

0 references

Rebecca H Herbst

5

0 references

Brian X León-Ricardo

6

0 references

Gerald Fink

11

0 references

language of work or name

English

0 references

publication date

25 September 2014

0 references

1 reference

PubMed publication ID

25219674

describes a project that uses

1 December 2016

volume

159

0 references

issue

1

0 references

page(s)

148-62

0 references

ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4180118/fullTextXML

inferred from PubMed Central ID database lookup

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

1 reference

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29 September 2017

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An essential yeast protein, CBF5p, binds in vitro to centromeres and microtubules

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Mapping of the 13 pseudouridine residues in Saccharomyces cerevisiae small subunit ribosomal RNA to nucleotide resolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Pseudouridine in the large-subunit (23 S-like) ribosomal RNA. The site of peptidyl transfer in the ribosome?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Anomalous electrophoretic migration of newly synthesized ribosomal RNAs and their precursors from cells with DKC1 mutations

2 June 2018

1 reference

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Dyskeratosis congenita, a disease caused by defective telomere maintenance

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

The effect of pseudouridine and pH on the structure and dynamics of the anticodon stem-loop of tRNA(Lys,3).

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Investigation of nucleic acid secondary structure by means of chemical modification with a carbodiimide reagent. II. Reaction between N-cyclohexyl-N'-β-(4-methylmorpholinium)ethylcarbodiimide and transfer ribonucleic acid

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Pus1p-dependent tRNA pseudouridinylation becomes essential when tRNA biogenesis is compromised in yeast.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Clustering of pseudouridine residues around the peptidyltransferase center of yeast cytoplasmic and mitochondrial ribosomes.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Reaction of pseudouridine and inosine with N-cyclohexyl-N'-beta-(4-methylmorpholinium)ethylcarbodiimide

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4180118

Pathophysiology and genetic mutations in congenital sideroblastic anemia

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/25219674

12 December 2020

inferred from PubMed ID database lookup

Investigation of nucleic acid secondary structure by means of chemical modification with a carbodiimide reagent. I. Reaction between N-cyclohexyl-N'-β-(4-methylmorpholinium)ethylcarbodiimide and model nucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/25219674

12 December 2020

inferred from PubMed ID database lookup

Mapping of pseudouridine residues in RNA to nucleotide resolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/25219674

12 December 2020