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H2A.Z: a molecular rheostat for transcriptional control
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title
H2A.Z: a molecular rheostat for transcriptional control
(English)
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PubMed
author
Laurie A. Boyer
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Laurie A. Boyer
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Vidya Subramanian
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Vidya Subramanian
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Paul A. Fields
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English
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publication date
5 January 2015
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F1000prime reports
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7
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01
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cites work
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The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer
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Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity
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Essential role of p18Hamlet/SRCAP-mediated histone H2A.Z chromatin incorporation in muscle differentiation
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The euchromatic and heterochromatic landscapes are shaped by antagonizing effects of transcription on H2A.Z deposition
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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
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Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning
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The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken
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Crystal structure of a nucleosome core particle containing the variant histone H2A.Z
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Distinct factors control histone variant H3.3 localization at specific genomic regions
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A combination of H2A.Z and H4 acetylation recruits Brd2 to chromatin during transcriptional activation
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Gene reactivation by 5-aza-2'-deoxycytidine-induced demethylation requires SRCAP-mediated H2A.Z insertion to establish nucleosome depleted regions
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Super-enhancers in the control of cell identity and disease
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Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells
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Central and peripheral circadian clocks in mammals
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The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly
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Targeting polycomb to pericentric heterochromatin in embryonic stem cells reveals a role for H2AK119u1 in PRC2 recruitment.
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29 September 2017
Arabidopsis replacement histone variant H3.3 occupies promoters of regulated genes
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Histone variants: dynamic punctuation in transcription
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29 September 2017
Nucleosomes are context-specific, H2A.Z-modulated barriers to RNA polymerase
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Targeting STAT5 in hematologic malignancies through inhibition of the bromodomain and extra-terminal (BET) bromodomain protein BRD2.
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29 September 2017
Histone H2A.Z deregulation in prostate cancer. Cause or effect?
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29 September 2017
CLOCK:BMAL1 is a pioneer-like transcription factor
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Post-translational modifications of the histone variant H2AZ.
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29 September 2017
Hira-dependent histone H3.3 deposition facilitates PRC2 recruitment at developmental loci in ES cells
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29 September 2017
H3.3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin.
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PubMed Central
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29 September 2017
H2A.Z acidic patch couples chromatin dynamics to regulation of gene expression programs during ESC differentiation
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29 September 2017
BET bromodomains mediate transcriptional pause release in heart failure
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29 September 2017
Histone variants in pluripotency and disease
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29 September 2017
BRD4 coordinates recruitment of pause release factor P-TEFb and the pausing complex NELF/DSIF to regulate transcription elongation of interferon-stimulated genes
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29 September 2017
Histone chaperones in nucleosome assembly and human disease
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29 September 2017
H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation.
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29 September 2017
Mediator-regulated transcription through the +1 nucleosome
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29 September 2017
H2A.Z-dependent crosstalk between enhancer and promoter regulates cyclin D1 expression
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29 September 2017
H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions
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29 September 2017
Histone H2A variants in nucleosomes and chromatin: more or less stable?
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PubMed Central
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29 September 2017
Genome-wide structure and organization of eukaryotic pre-initiation complexes
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PubMed Central
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29 September 2017
Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer
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PubMed Central
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29 September 2017
Readers of histone modifications
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PubMed Central
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29 September 2017
USP10 deubiquitylates the histone variant H2A.Z and both are required for androgen receptor-mediated gene activation
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PubMed Central
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29 September 2017
Bromodomain coactivators in cancer, obesity, type 2 diabetes, and inflammation
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PubMed Central
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29 September 2017
H2A.Z nucleosomes enriched over active genes are homotypic
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Individual lysine acetylations on the N terminus of Saccharomyces cerevisiae H2A.Z are highly but not differentially regulated
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Random deposition of histone variants: A cellular mistake or a novel regulatory mechanism?
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PubMed Central
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29 September 2017
Cooperative action of TIP48 and TIP49 in H2A.Z exchange catalyzed by acetylation of nucleosomal H2A.
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PubMed Central
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29 September 2017
Histone H2A.Z is essential for estrogen receptor signaling
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PubMed Central
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29 September 2017
Role of the histone variant H2A.Z/Htz1p in TBP recruitment, chromatin dynamics, and regulated expression of oleate-responsive genes
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PubMed Central
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29 September 2017
Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells.
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29 September 2017
Dynamic histone variant exchange accompanies gene induction in T cells
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29 September 2017
H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
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PubMed Central
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29 September 2017
H2A.Z: view from the top.
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PubMed Central
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29 September 2017
Monoubiquitylation of H2A.Z distinguishes its association with euchromatin or facultative heterochromatin
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Nucleosome stability mediated by histone variants H3.3 and H2A.Z.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Histone H4 lysine 16 acetylation breaks the genome's silence
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PubMed Central
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29 September 2017
Purification of a human SRCAP complex that remodels chromatin by incorporating the histone variant H2A.Z into nucleosomes
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
The Saccharomyces cerevisiae histone H2A variant Htz1 is acetylated by NuA4.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
Histone variants meet their match
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
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29 September 2017
DNA double-strand break-induced phosphorylation of Drosophila histone variant H2Av helps prevent radiation-induced apoptosis
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PubMed Central
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29 September 2017
SWR-C and INO80 chromatin remodelers recognize nucleosome-free regions near +1 nucleosomes.
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PubMed Central
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2 June 2018
Foxa2 and H2A.Z mediate nucleosome depletion during embryonic stem cell differentiation
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2 June 2018
Histone H2A.Z controls a critical chromatin remodeling step required for DNA double-strand break repair
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PubMed Central
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2 June 2018
Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression.
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PubMed Central
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27 November 2018
Histone H2A.Z inheritance during the cell cycle and its impact on promoter organization and dynamics.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
retrieved
27 November 2018
Histone variant H2A.Z inhibits transcription in reconstituted nucleosomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
retrieved
27 November 2018
Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
retrieved
27 November 2018
A new fluorescence resonance energy transfer approach demonstrates that the histone variant H2AZ stabilizes the histone octamer within the nucleosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
retrieved
27 November 2018
Histone H2A.Z is widely but nonrandomly distributed in chromosomes of Drosophila melanogaster
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4311278
retrieved
27 November 2018
The essential histone variant H2A.Z regulates the equilibrium between different chromatin conformational states
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25705384
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Histone H2A.Z prepares the prostate specific antigen (PSA) gene for androgen receptor-mediated transcription and is upregulated in a model of prostate cancer progression
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25705384
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.12703/P7-01
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3392019
OpenCitations bibliographic resource ID
3392019
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3392019
PMCID
4311278
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3392019
PubMed ID
25705384
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3392019
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