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Conservation of an intricate circuit for crucial modifications of the tRNAPhe anticodon loop in eukaryotes
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scholarly article
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
title
Conservation of an intricate circuit for crucial modifications of the tRNAPhe anticodon loop in eukaryotes
(English)
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
main subject
FtsJ RNA 2'-O-methyltransferase 1
1 reference
stated in
GOA release 2020-03-11
tRNA (cytosine-2'-O-)-methyltransferase activity
1 reference
stated in
GOA release 2020-03-11
author name string
Michael P. Guy
series ordinal
1
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
Eric M. Phizicky
series ordinal
2
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
language of work or name
English
0 references
publication date
1 January 2015
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
published in
RNA
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
volume
21
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
page(s)
61–74
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
issue
1
1 reference
stated in
PubMed
PubMed ID
25404562
retrieved
4 January 2017
cites work
The Revised Classification of Eukaryotes
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stated in
PubMed Central
reference URL
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20 March 2017
Mammalian ALKBH8 possesses tRNA methyltransferase activity required for the biogenesis of multiple wobble uridine modifications implicated in translational decoding
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PubMed Central
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20 March 2017
Human AlkB homolog ABH8 Is a tRNA methyltransferase required for wobble uridine modification and DNA damage survival
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Elongator controls the migration and differentiation of cortical neurons through acetylation of alpha-tubulin
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PubMed Central
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20 March 2017
Mutations in the FTSJ1 gene coding for a novel S-adenosylmethionine-binding protein cause nonsyndromic X-linked mental retardation
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PubMed Central
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20 March 2017
Improvement of reading frame maintenance is a common function for several tRNA modifications
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PubMed Central
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20 March 2017
Familial dysautonomia is caused by mutations of the IKAP gene
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20 March 2017
Regulation of physiological rates in Caenorhabditis elegans by a tRNA-modifying enzyme in the mitochondria
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PubMed Central
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20 March 2017
Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA
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PubMed Central
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20 March 2017
2'-O-methylation of the wobble residue of elongator pre-tRNA(Met) in Haloferax volcanii is guided by a box C/D RNA containing unique features
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
A splice site mutation in the methyltransferase gene FTSJ1 in Xp11.23 is associated with non-syndromic mental retardation in a large Belgian family (MRX9)
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Novel methyltransferase for modified uridine residues at the wobble position of tRNA.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Two novel WD40 domain-containing proteins, Ere1 and Ere2, function in the retromer-mediated endosomal recycling pathway.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
The highly conserved KEOPS/EKC complex is essential for a universal tRNA modification, t6A.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
1 reference
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PubMed Central
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20 March 2017
Elevated levels of two tRNA species bypass the requirement for elongator complex in transcription and exocytosis.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Identification of the yeast gene encoding the tRNA m1G methyltransferase responsible for modification at position 9.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Yeast Trm7 interacts with distinct proteins for critical modifications of the tRNAPhe anticodon loop.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
An adenosine deaminase that generates inosine at the wobble position of tRNAs
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Isolation and characterization of MOD5, a gene required for isopentenylation of cytoplasmic and mitochondrial tRNAs of Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
The human tRNA(m(2)(2)G(26))dimethyltransferase: functional expression and characterization of a cloned hTRM1 gene
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Defective i6A37 modification of mitochondrial and cytosolic tRNAs results from pathogenic mutations in TRIT1 and its substrate tRNA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
MODOMICS: a database of RNA modification pathways--2013 update
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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20 March 2017
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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7 April 2017
tRNA's wobble decoding of the genome: 40 years of modification
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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7 April 2017
The origin and evolution of model organisms
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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7 April 2017
RNA function. Ribosome stalling induced by mutation of a CNS-specific tRNA causes neurodegeneration.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Modification of tRNA(Lys) UUU by elongator is essential for efficient translation of stress mRNAs.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Lack of tRNA modification isopentenyl-A37 alters mRNA decoding and causes metabolic deficiencies in fission yeast.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
A genetic investigation of the KEOPS complex in halophilic Archaea
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Whole exome sequencing identifies a splicing mutation in NSUN2 as a cause of a Dubowitz-like syndrome
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Mutation in NSUN2, which encodes an RNA methyltransferase, causes autosomal-recessive intellectual disability
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Mutations in NSUN2 cause autosomal-recessive intellectual disability.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Elongator complex influences telomeric gene silencing and DNA damage response by its role in wobble uridine tRNA modification
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Unexpected accumulation of ncm(5)U and ncm(5)S(2) (U) in a trm9 mutant suggests an additional step in the synthesis of mcm(5)U and mcm(5)S(2)U
1 reference
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PubMed Central
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29 September 2017
A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification
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PubMed Central
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29 September 2017
Armadillo-repeat protein functions: questions for little creatures
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29 September 2017
Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
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29 September 2017
A role for the elongator complex in zygotic paternal genome demethylation
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29 September 2017
Do all modifications benefit all tRNAs?
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PubMed Central
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29 September 2017
Mitochondrial dysfunction increases oxidative stress and decreases chronological life span in fission yeast
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PubMed Central
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29 September 2017
Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Eukaryotic wobble uridine modifications promote a functionally redundant decoding system.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Chromatin-associated genes protect the yeast genome from Ty1 insertional mutagenesis
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PubMed Central
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29 September 2017
Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases
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PubMed Central
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29 September 2017
New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
tadA, an essential tRNA-specific adenosine deaminase from Escherichia coli
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Comparison of Schizosaccharomyces pombe expression systems
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Changes of post-transcriptional modification of wye base in tumor-specific tRNAPhe
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4274638
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29 September 2017
Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification
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PubMed Central
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29 September 2017
Isopentenyladenosine deficient tRNA from an antisuppressor mutant of Saccharomyces cerevisiae
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PubMed Central
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29 September 2017
tRNAHis 5-methylcytidine levels increase in response to several growth arrest conditions in Saccharomyces cerevisiae.
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2 June 2018
Trm9-catalyzed tRNA modifications link translation to the DNA damage response
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2 June 2018
Striking conservation of TFIID in Schizosaccharomyces pombe and Saccharomyces cerevisiae
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2 June 2018
Mutation in ADAT3, encoding adenosine deaminase acting on transfer RNA, causes intellectual disability and strabismus.
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Crossref
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21 January 2018
Rapid tRNA decay can result from lack of nonessential modifications.
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Crossref
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https://api.crossref.org/works/10.1261%2FRNA.047639.114
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21 January 2018
Loss of SLC38A5 and FTSJ1 at Xp11.23 in three brothers with non-syndromic mental retardation due to a microdeletion in an unstable genomic region.
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Crossref
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21 January 2018
Deep sequencing reveals 50 novel genes for recessive cognitive disorders.
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Crossref
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21 January 2018
Heterologous expression of L. major proteins in S. cerevisiae: a test of solubility, purity, and gene recoding.
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Crossref
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21 January 2018
A loss-of-function mutation in the FTSJ1 gene causes nonsyndromic X-linked mental retardation in a Japanese family
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1261%2FRNA.047639.114
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21 January 2018
Identification of a gene rearranged by 2p21 aberrations in thyroid adenomas
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25404562
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A single methyl group prevents the mischarging of a tRNA
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25404562
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1261/RNA.047639.114
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2225462
OpenCitations bibliographic resource ID
2225462
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2225462
PMCID
4274638
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2225462
PubMed ID
25404562
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2225462
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