(Q28250601)

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8 January 2020

title

Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home (English)

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8 January 2020

1

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8 January 2020

Lars Malmström

13

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8 January 2020

Chu Wang

15

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8 January 2020

Ingemar André

16

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8 January 2020

David Baker

17

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8 January 2020

author name string

Bin Qian

2

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8 January 2020

Srivatsan Raman

3

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8 January 2020

Robert Vernon

4

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8 January 2020

James Thompson

5

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8 January 2020

Philip Bradley

6

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8 January 2020

Sagar Khare

7

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8 January 2020

Michael D Tyka

8

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8 January 2020

Divya Bhat

9

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8 January 2020

Dylan Chivian

10

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8 January 2020

David E Kim

11

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8 January 2020

William H Sheffler

12

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8 January 2020

Andrew M Wollacott

14

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8 January 2020

language of work or name

English

0 references

publication date

1 January 2007

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8 January 2020

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8 January 2020

volume

69 Suppl 8

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8 January 2020

page(s)

118-128

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Improved side-chain modeling for protein-protein docking

8 January 2020

cites work

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Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection

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Automated prediction of domain boundaries in CASP6 targets using Ginzu and RosettaDOM.

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9 October 2024

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Improved beta-protein structure prediction by multilevel optimization of nonlocal strand pairings and local backbone conformation.

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Effective energy function for proteins in solution

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Pfam: clans, web tools and services

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Cyclic coordinate descent: A robotics algorithm for protein loop closure.

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Predicting coiled coils from protein sequences

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Protein structure prediction using Rosetta

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9 October 2024

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LGA: A method for finding 3D similarities in protein structures

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Progress in modeling of protein structures and interactions

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Comparative protein modelling by satisfaction of spatial restraints

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9 October 2024

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Free modeling with Rosetta in CASP6

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9 October 2024

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9 October 2024

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Modeling structurally variable regions in homologous proteins with rosetta.

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9 October 2024

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Prediction of structures of multidomain proteins from structures of the individual domains

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9 October 2024

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9 October 2024

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Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA

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9 October 2024

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TASSER: an automated method for the prediction of protein tertiary structures in CASP6.

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9 October 2024

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CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

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9 October 2024

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Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions

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9 October 2024

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3D-Jury: a simple approach to improve protein structure predictions

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9 October 2024

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Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set.

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9 October 2024

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BOINC: A System for Public-Resource Computing and Storage

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9 October 2024

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Toward high-resolution de novo structure prediction for small proteins.

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9 October 2024

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The PSIPRED protein structure prediction server

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9 October 2024

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Thyrotropin-releasing hormone stimulates phosphorylation of the epidermal growth factor receptor in GH3 pituitary cells.

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9 October 2024

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X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil

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9 October 2024

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Predicting coiled coils by use of pairwise residue correlations

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9 October 2024

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Cascaded multiple classifiers for secondary structure prediction

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Coupled prediction of protein secondary and tertiary structure

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Solvation energy in protein folding and binding

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Prediction of CASP6 structures using automated Robetta protocols

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9 October 2024

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Identifiers

DOI

10.1002/PROT.21636

2 references

Consolidated OpenCitations Corpus – April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17894356%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

1 reference

Consolidated OpenCitations Corpus – April 2017

2 references

Consolidated OpenCitations Corpus – April 2017