(Q28294967)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

title

HCV IRES interacts with the 18S rRNA to activate the 40S ribosome for subsequent steps of translation initiation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

author

Ivan Nikolaevich Shatsky

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

author name string

Alexey A Malygin

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Olga A Kossinova

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Galina G Karpova

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

language of work or name

English

0 references

publication date

19 July 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

volume

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

issue

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

page(s)

8706-8714

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

5 March 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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The structure of the eukaryotic ribosome at 3.0 Å resolution

20 March 2017

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Crystal structure of the HCV IRES central domain reveals strategy for start-codon positioning

20 March 2017

1 reference

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Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1

20 March 2017

1 reference

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Crystal structure of the eukaryotic ribosome

20 March 2017

1 reference

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The pathway of hepatitis C virus mRNA recruitment to the human ribosome

20 March 2017

1 reference

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Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome

20 March 2017

1 reference

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Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes

20 March 2017

1 reference

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The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome

20 March 2017

1 reference

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A Distinct Group of Hepacivirus/Pestivirus-Like Internal Ribosomal Entry Sites in Members of Diverse Picornavirus Genera: Evidence for Modular Exchange of Functional Noncoding RNA Elements by Recombination

20 March 2017

1 reference

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Structure of the 70S ribosome complexed with mRNA and tRNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Proteins surrounding hairpin IIIe of the hepatitis C virus internal ribosome entry site on the human 40S ribosomal subunit

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Antisense oligonucleotides targeted to the domain IIId of the hepatitis C virus IRES compete with 40S ribosomal subunit binding and prevent in vitro translation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Ribosomal proteins mediate the hepatitis C virus IRES-HeLa 40S interaction

20 March 2017

1 reference

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The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs

20 March 2017

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Genetic analysis of a poliovirus/hepatitis C virus chimera: new structure for domain II of the internal ribosomal entry site of hepatitis C virus

20 March 2017

1 reference

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Mechanism of ribosome recruitment by hepatitis C IRES RNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Hepatitis C virus internal ribosome entry site (IRES) stem loop IIId contains a phylogenetically conserved GGG triplet essential for translation and IRES folding

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

An enzymatic footprinting analysis of the interaction of 40S ribosomal subunits with the internal ribosomal entry site of hepatitis C virus

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

A phylogenetically conserved stem-loop structure at the 5' border of the internal ribosome entry site of hepatitis C virus is required for cap-independent viral translation.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

The mechanism of eukaryotic translation initiation and principles of its regulation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Hepatitis C virus IRES RNA-induced changes in the conformation of the 40s ribosomal subunit

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Unique features of internal initiation of hepatitis C virus RNA translation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

HCV IRES domain IIb affects the configuration of coding RNA in the 40S subunit's decoding groove

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

eIF2A mediates translation of hepatitis C viral mRNA under stress conditions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing.

29 September 2017

1 reference

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IRES-induced conformational changes in the ribosome and the mechanism of translation initiation by internal ribosomal entry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Eukaryotic translation initiation machinery can operate in a bacterial-like mode without eIF2.

29 September 2017

1 reference

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Accessibility of 18S rRNA in human 40S subunits and 80S ribosomes at physiological magnesium ion concentrations--implications for the study of ribosome dynamics

29 September 2017

1 reference

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Coordinated assembly of human translation initiation complexes by the hepatitis C virus internal ribosome entry site RNA.

29 September 2017

1 reference

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Cap-dependent and cap-independent translation in eukaryotic systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Proteins of the human 40S ribosomal subunit involved in hepatitis C IRES binding as revealed from fluorescent labeling.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Structure of the hepatitis C virus IRES bound to the human 80S ribosome: remodeling of the HCV IRES.

2 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT632

Ribosomal protein S5 interacts with the internal ribosomal entry site of hepatitis C virus

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT632

Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT632

Approach to identifying the functionally important segments of RNA, based on complementation-addressed modification

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

The mRNA codon environment at the P and E sites of human ribosomes deduced from photo crosslinking with pUUUGUU

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794592

Isolation of ribosomal subunits containing intact rRNA from human placenta: Estimation of functional activity of 80S ribosomes

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23873958

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT632

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23873958%20AND%20SRC:MED&resulttype=core&format=json