(Q28472226)

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Rational mutational analysis of a multidrug MFS transporter CaMdr1p of Candida albicans by employing a membrane environment based computational approach

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scholarly article

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Rational mutational analysis of a multidrug MFS transporter CaMdr1p of Candida albicans by employing a membrane environment based computational approach (English)

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Candida albicans

1 reference

based on heuristic

inferred from title

mutational analysis

1 reference

based on heuristic

inferred from title

Rajendra Prasad

6

object named as

Rajendra Prasad

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author name string

Khyati Kapoor

1

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Mohd Rehan

2

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Ajeeta Kaushiki

3

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Ritu Pasrija

4

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Andrew M Lynn

5

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language of work or name

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publication date

December 2009

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PLOS Computational Biology

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5

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12

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e1000624

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copyright license

Creative Commons Attribution 4.0 International

24 December 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Structure of the multidrug transporter EmrD from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Structure and mechanism of the lactose permease of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

The multidrug transporters belonging to major facilitator superfamily in Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

ATPase and multidrug transport activities of the overexpressed yeast ABC protein Yor1p

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Major facilitator superfamily

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

ALSCRIPT: a tool to format multiple sequence alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Amino acid substitution matrices from protein blocks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

Determinants of protein function revealed by combinatorial entropy optimization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

19 March 2017

The amino acid residues of transmembrane helix 5 of multidrug resistance protein CaCdr1p of Candida albicans are involved in substrate specificity and drug transport

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Drug:H+ antiporters in chemical stress response in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

MFS transportome of the human pathogenic yeast Candida albicans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Ins and outs of major facilitator superfamily antiporters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

A mutation of the H-loop selectively affects rhodamine transport by the yeast multidrug ABC transporter Pdr5.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

HMM-ModE--improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying emission probabilities with negative training sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Incorporating background frequency improves entropy-based residue conservation measures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

The calcium channel blockers, 1,4-dihydropyridines, are substrates of the multidrug resistance-linked ABC drug transporter, ABCG2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Lessons from lactose permease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Experimental tests of a homology model for OxlT, the oxalate transporter of Oxalobacter formigenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Multidrug resistance in yeast Candida

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Functional characterization of Candida albicans ABC transporter Cdr1p.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Amino acids determining enzyme-substrate specificity in prokaryotic and eukaryotic protein kinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Transmembrane helix predictions revisited

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Multiple membrane-associated tryptophan residues contribute to the transport activity and substrate specificity of the human multidrug resistance protein, MRP1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Scoring residue conservation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Functional expression of Candida albicans drug efflux pump Cdr1p in a Saccharomyces cerevisiae strain deficient in membrane transporters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

The TetA(K) tetracycline/H(+) antiporter from Staphylococcus aureus: mutagenesis and functional analysis of motif C.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Conserved cytoplasmic loops are important for both the transport and chemotaxis functions of PcaK, a protein from Pseudomonas putida with 12 membrane-spanning regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Proton-dependent multidrug efflux systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

The functions of tryptophan residues in membrane proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

29 September 2017

Characterization and prediction of residues determining protein functional specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

2 June 2018

No single irreplaceable acidic residues in the Escherichia coli secondary multidrug transporter MdfA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

2 June 2018

The mathematical theory of communication. 1963.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

2 June 2018

The transmembrane domain 10 of the yeast Pdr5p ABC antifungal efflux pump determines both substrate specificity and inhibitor susceptibility.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Mutational analysis of the yeast multidrug resistance ABC transporter Pdr5p with altered drug specificity.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Alanine scanning of transmembrane helix 11 of Cdr1p ABC antifungal efflux pump of Candida albicans: identification of amino acid residues critical for drug efflux.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

PHAT: a transmembrane-specific substitution matrix. Predicted hydrophobic and transmembrane

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Analysis and prediction of functional sub-types from protein sequence alignments.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Prediction of protein functional residues from sequence by probability density estimation.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Structure and function analysis of CaMdr1p, a major facilitator superfamily antifungal efflux transporter protein of Candida albicans: identification of amino acid residues critical for drug/H+ transport

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Mutational and bioinformatics analysis of proline- and glycine-rich motifs in vesicular acetylcholine transporter

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

Using information theory to search for co-evolving residues in proteins

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000624

21 January 2018

ABC transporters Cdr1p, Cdr2p and Cdr3p of a human pathogen Candida albicans are general phospholipid translocators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

27 November 2018

Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2789324

27 November 2018

PRALINETM: a strategy for improved multiple alignment of transmembrane proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/20041202

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete inventory of ABC proteins in human pathogenic yeast, Candida albicans

1 reference

https://pubmed.ncbi.nlm.nih.gov/20041202

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PCBI.1000624

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DBLP publication ID

journals/ploscb/KapoorRKPLP09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

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PubMed publication ID

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ResearchGate publication ID

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