(Q28482466)

Louis Ranjard

7

0 references

Yoshinori Tamada

Yoshinori Tamada

5

0 references

Cristin Print

Cristin G Print

12

0 references

Satoru Miyano

10

Satoru Miyano

0 references

author name string

Li Wang

1

0 references

Wendy Watkins

3

0 references

Hiromitsu Araki

4

0 references

Anita Muthukaruppan

6

0 references

Eliane Derkac

8

0 references

Seiya Imoto

9

0 references

Edmund J Crampin

Creative Commons Attribution 4.0 International

11

0 references

language of work or name

English

0 references

publication date

2012

0 references

published in

PLOS One

0 references

volume

7

0 references

issue

4

0 references

page(s)

e34247

0 references

copyright license

start time

20 April 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

1 reference

Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/3335030

inferred from PubMed Central ID database lookup

Cytoscape

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Clinical efficacy of a RAF inhibitor needs broad target blockade in BRAF-mutant melanoma

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Improved Survival with Ipilimumab in Patients with Metastatic Melanoma

19 March 2017

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KEGG for representation and analysis of molecular networks involving diseases and drugs

19 March 2017

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Integrative analysis of epigenetic modulation in melanoma cell response to decitabine: clinical implications

19 March 2017

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Rewired ERK-JNK signaling pathways in melanoma

19 March 2017

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Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations

19 March 2017

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

19 March 2017

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From genomics to chemical genomics: new developments in KEGG

19 March 2017

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Critical role of CDK2 for melanoma growth linked to its melanocyte-specific transcriptional regulation by MITF

19 March 2017

1 reference

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Fotemustine compared with dacarbazine in patients with disseminated malignant melanoma: a phase III study

19 March 2017

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Summaries of Affymetrix GeneChip probe level data

19 March 2017

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Interaction among SOX10, PAX3 and MITF, three genes altered in Waardenburg syndrome

19 March 2017

1 reference

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Gene ontology: tool for the unification of biology

19 March 2017

1 reference

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Negative regulation of PKB/Akt-dependent cell survival by the tumor suppressor PTEN

19 March 2017

1 reference

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In vitro cultivation of human tumors: establishment of cell lines derived from a series of solid tumors

19 March 2017

1 reference

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Mitf cooperates with Rb1 and activates p21Cip1 expression to regulate cell cycle progression

19 March 2017

1 reference

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Gene Expression Profiling of Primary Cutaneous Melanoma and Clinical Outcome

19 March 2017

1 reference

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The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease

23 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

TRANSFAC: transcriptional regulation, from patterns to profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Final version of 2009 AJCC melanoma staging and classification

7 April 2017

1 reference

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Oncogenic pathway signatures in human cancers as a guide to targeted therapies

7 April 2017

1 reference

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Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

A gene-coexpression network for global discovery of conserved genetic modules

7 April 2017

1 reference

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Diagnosis of multiple cancer types by shrunken centroids of gene expression

7 April 2017

1 reference

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Controlling the false discovery rate in behavior genetics research

7 April 2017

1 reference

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Phase I study of single-agent anti-programmed death-1 (MDX-1106) in refractory solid tumors: safety, clinical activity, pharmacodynamics, and immunologic correlates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Molecular classification of cutaneous malignant melanoma by gene expression profiling

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Mitf is the key molecular switch between mouse or human melanoma initiating cells and their differentiated progeny.

7 April 2017

1 reference

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29 September 2017

1 reference

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Multicenter phase II study of matured dendritic cells pulsed with melanoma cell line lysates in patients with advanced melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Gene signature in melanoma associated with clinical activity: a potential clue to unlock cancer immunotherapy

29 September 2017

1 reference

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Gene signature of the metastatic potential of cutaneous melanoma: too much for too little?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

A gene expression signature of invasive potential in metastatic melanoma cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Genetic risk factors for melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

BRAF signaling and targeted therapies in melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

A novel strategy to search conserved transcription factor binding sites among coexpressing genes in human.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Association of MDM2 SNP309, age of onset, and gender in cutaneous melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Genetics, cellular biology and tumor microenvironment of melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Melanoma progression, gene expression and DNA microarrays.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Microarray-based gene set analysis: a comparison of current methods

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

The impact of genomics in understanding human melanoma progression and metastasis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Gene expression changes in an animal melanoma model correlate with aggressiveness of human melanoma metastases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

DNA microarray technology in dermatology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Cutaneous melanoma: fishing with chips

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Getting started in biological pathway construction and analysis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

The gene expression profiles of primary and metastatic melanoma yields a transition point of tumor progression and metastasis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Revisiting adverse effects of cross-hybridization in Affymetrix gene expression data: do they matter for correlation analysis?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in laser-microdissected melanoma tissues

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

A gene expression signature associated with survival in metastatic melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Features associated with germline CDKN2A mutations: a GenoMEL study of melanoma-prone families from three continents

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

E2-EPF UCP targets pVHL for degradation and associates with tumor growth and metastasis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Cell cycle regulation of the T-box transcription factor tbx2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Whole-genome expression profiling of the melanoma progression pathway reveals marked molecular differences between nevi/melanoma in situ and advanced-stage melanomas

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

The gene expression signatures of melanoma progression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Coexpression analysis of human genes across many microarray data sets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

BRAF oncogenic mutations correlate with progression rather than initiation of human melanoma.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

PTEN signaling pathways in melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Relevance of ultraviolet-induced N-ras oncogene point mutations in development of primary human cutaneous melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

A role for topical 5-fluorouracil therapy in melanoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

COXPRESdb: a database to compare gene coexpression in seven model animals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

How to infer gene networks from expression profiles

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Immunopharmacologic analysis of an autologous, hapten-modified human melanoma vaccine

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Prognostic significance of activated Akt expression in melanoma: a clinicopathologic study of 292 cases

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Estimating genome-wide gene networks using nonparametric Bayesian network models on massively parallel computers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

GATHER: a systems approach to interpreting genomic signatures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Moderated effect size and P-value combinations for microarray meta-analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Predicting clinical outcome through molecular profiling in stage III melanoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Novel genes associated with malignant melanoma but not benign melanocytic lesions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Retinoblastoma, melanoma and the atypical mole syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Genotype-Phenotype Relationships in U.S. Melanoma-Prone Families With CDKN2A and CDK4 Mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Brn-2 Represses Microphthalmia-Associated Transcription Factor Expression and Marks a Distinct Subpopulation of Microphthalmia-Associated Transcription Factor-Negative Melanoma Cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

BRAF and NRAS Mutations Are Frequent in Nodular Melanoma but Are not Associated with Tumor Cell Proliferation or Patient Survival

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0034247

Computational strategy for discovering druggable gene networks from genome-wide RNA expression profiles.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3335030

Immunologic therapy targeting metastatic melanoma: allovectin-7

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22536322

12 December 2020

inferred from PubMed ID database lookup

Micropthalmia transcription factor: a new prognostic marker in intermediate-thickness cutaneous malignant melanoma

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22536322

12 December 2020

inferred from PubMed ID database lookup

Expression profiling reveals novel pathways in the transformation of melanocytes to melanomas

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22536322

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1371/JOURNAL.PONE.0034247

1 reference

ADS bibcode

2012PLoSO...734247W

0 references

1 reference

1 reference

PubMed publication ID

22536322

1 reference