(Q28538328)

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The position of DNA cleavage by TALENs and cell synchronization influences the frequency of gene editing directed by single-stranded oligonucleotides

scientific article (publication date: 2014)

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scholarly article

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The position of DNA cleavage by TALENs and cell synchronization influences the frequency of gene editing directed by single-stranded oligonucleotides (English)

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Natalia Rivera-Torres

object named as

Natalia Rivera-Torres

1

author given names

Natalia

author last names

Rivera-Torres

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PubMed publication ID

22 October 2023

author name string

Bryan Strouse

2

author given names

Bryan

author last names

Strouse

1 reference

PubMed publication ID

22 October 2023

Pawel Bialk

3

author given names

Pawel

author last names

Bialk

1 reference

PubMed publication ID

22 October 2023

Rohina A Niamat

4

author given names

Rohina A

author last names

Niamat

1 reference

PubMed publication ID

22 October 2023

Eric B Kmiec

5

author given names

Eric B

author last names

Kmiec

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PubMed publication ID

22 October 2023

language of work or name

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publication date

2014

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9

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5

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e96483

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copyright license

Creative Commons Attribution 4.0 International

1 May 2014

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April 2022 Public Data File from Crossref

copyright status

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Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

19 March 2017

Multiplex genome engineering using CRISPR/Cas systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

19 March 2017

Targeted genome editing across species using ZFNs and TALENs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

19 March 2017

Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

19 March 2017

Genome Engineering With Zinc-Finger Nucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

7 April 2017

Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

7 April 2017

Isolation of single-base genome-edited human iPS cells without antibiotic selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Directed evolution of the TALE N-terminal domain for recognition of all 5' bases.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Optimization of scarless human stem cell genome editing

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

High-efficiency and heritable gene targeting in mouse by transcription activator-like effector nucleases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Direct production of mouse disease models by embryo microinjection of TALENs and oligodeoxynucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

A large-scale in vivo analysis reveals that TALENs are significantly more mutagenic than ZFNs generated using context-dependent assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

TAL effectors: function, structure, engineering and applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

A TALEN genome-editing system for generating human stem cell-based disease models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Proliferation of genetically modified human cells on electrospun nanofiber scaffolds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

TALENs: a widely applicable technology for targeted genome editing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Iterative capped assembly: rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

TAL effectors: customizable proteins for DNA targeting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Progress and prospects: oligonucleotide-directed gene modification in mouse embryonic stem cells: a route to therapeutic application.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Sequence conversion by single strand oligonucleotide donors via non-homologous end joining in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Parameters of oligonucleotide-mediated gene modification in mouse ES cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

DNA breakage associated with targeted gene alteration directed by DNA oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Regulation of targeted gene repair by intrinsic cellular processes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Progress and prospects: targeted gene alteration (TGA).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Manipulation of cell cycle progression can counteract the apparent loss of correction frequency following oligonucleotide-directed gene repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

The involvement of replication in single stranded oligonucleotide-mediated gene repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Conservative repair of a chromosomal double-strand break by single-strand DNA through two steps of annealing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Physical incorporation of a single-stranded oligodeoxynucleotide during targeted repair of a human chromosomal locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Gene repair in mammalian cells is stimulated by the elongation of S phase and transient stalling of replication forks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Camptothecin enhances the frequency of oligonucleotide-directed gene repair in mammalian cells by inducing DNA damage and activating homologous recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Enhanced oligonucleotide-directed gene targeting in mammalian cells following treatment with DNA damaging agents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Mechanisms underlying targeted gene correction using chimeric RNA/DNA and single-stranded DNA oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

The 'biased' evolution of targeted gene repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Strand bias in targeted gene repair is influenced by transcriptional activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

The DNA strand of chimeric RNA/DNA oligonucleotides can direct gene repair/conversion activity in mammalian and plant cell-free extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

29 September 2017

Combinatorial gene editing in mammalian cells using ssODNs and TALENs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

3 June 2018

Nuclease-mediated gene editing by homologous recombination of the human globin locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

3 June 2018

DNA damage response pathway and replication fork stress during oligonucleotide directed gene editing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

3 June 2018

In vivo genome editing using a high-efficiency TALEN system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4006861

3 June 2018

Genomic sequence correction by single-stranded DNA oligonucleotides: role of DNA synthesis and chemical modifications of the oligonucleotide ends

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

Implications of cell cycle progression on functional sequence correction by short single-stranded DNA oligonucleotides

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

DNA replication, cell cycle progression and the targeted gene repair reaction.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

Optimized TAL effector nucleases (TALENs) for use in treatment of sickle cell disease.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

Use of internally nuclease-protected single-strand DNA oligonucleotides and silencing of the mismatch repair protein, MSH2, enhances the replication of corrected cells following gene editing

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

Targeted gene correction by small single-stranded oligonucleotides in mammalian cells

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

Single-strand DNA-mediated targeted mutagenesis of genomic DNA in early mouse embryos is stimulated by Rad51/54 and by Ku70/86 inhibition

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096483

21 January 2018

Identifiers

10.1371/JOURNAL.PONE.0096483

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Consolidated OpenCitations Corpus – April 2017

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2014PLoSO...996483R

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Consolidated OpenCitations Corpus – April 2017

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PMC publication ID

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Consolidated OpenCitations Corpus – April 2017

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PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

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