(Q28539612)

1

Anna Kreshuk

0 references

Elizabeth Pax

3

Elizabeth Pax

0 references

Davi D Bock

4

Davi D Bock

0 references

Fred A Hamprecht

5

Creative Commons Attribution 4.0 International

Fred A Hamprecht

0 references

language of work or name

English

0 references

publication date

2014

0 references

published in

PLOS One

0 references

volume

9

0 references

issue

2

0 references

page(s)

e87351

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copyright license

start time

6 February 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

scikit-image

1 reference

Europe PubMed Central

8 June 2022

https://europepmc.org/search?query=(METHODS:'scikit-image')

inferred from PubMed Central ID database lookup

cites work

Machine learning of hierarchical clustering to segment 2D and 3D images

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

TrakEM2 software for neural circuit reconstruction

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Automated detection and segmentation of synaptic contacts in nearly isotropic serial electron microscopy images

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Network anatomy and in vivo physiology of visual cortical neurons

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Exploring the retinal connectome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Ome sweet ome: what can the genome tell us about the connectome?

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Serial block-face scanning electron microscopy to reconstruct three-dimensional tissue nanostructure

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

A high-throughput framework to detect synapses in electron microscopy images

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Cellular-resolution connectomics: challenges of dense neural circuit reconstruction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

29 September 2017

Why not connectomics?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Automated analysis of a diverse synapse population

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Semi-automated neuron boundary detection and nonbranching process segmentation in electron microscopy images

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Volume electron microscopy for neuronal circuit reconstruction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

The big and the small: challenges of imaging the brain's circuits

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Espina: a tool for the automated segmentation and counting of synapses in large stacks of electron microscopy images

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Wiring specificity in the direction-selectivity circuit of the retina

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

The Viking viewer for connectomics: scalable multi-user annotation and summarization of large volume data sets.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Ultrastructural analysis of hippocampal neuropil from the connectomics perspective

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3916342

Reading the book of memory: sparse sampling versus dense mapping of connectomes.

29 September 2017

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0087351

Connectomic reconstruction of the inner plexiform layer in the mouse retina

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0087351

3D segmentation of SBFSEM images of neuropil by a graphical model over supervoxel boundaries

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0087351

Graph Cuts and Efficient N-D Image Segmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0087351

Learning to segment neurons with non-local quality measures

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24516550

12 December 2020

inferred from PubMed ID database lookup

Serial Section Scanning Electron Microscopy of Adult Brain Tissue Using Focused Ion Beam Milling

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24516550

12 December 2020

inferred from PubMed ID database lookup

Learning context cues for synapse segmentation in EM volumes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24516550

12 December 2020

inferred from PubMed ID database lookup

Random Forests

1 reference

Astrophysics Data System

15 December 2022