(Q28554586)

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Large-Scale Off-Target Identification Using Fast and Accurate Dual Regularized One-Class Collaborative Filtering and Its Application to Drug Repurposing

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Large-Scale Off-Target Identification Using Fast and Accurate Dual Regularized One-Class Collaborative Filtering and Its Application to Drug Repurposing (English)

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collaborative filtering

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based on heuristic

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1

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27716836%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

5

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Europe PubMed Central

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2 June 2020

6

1 reference

Europe PubMed Central

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2 June 2020

author name string

Aleksandar Poleksic

2

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27716836%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Yuan Yao

3

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Europe PubMed Central

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2 June 2020

Hanghang Tong

4

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2 June 2020

Patrick Meng

7

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Europe PubMed Central

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2 June 2020

Lei Xie

8

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Europe PubMed Central

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2 June 2020

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October 2016

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PLOS Computational Biology

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2 June 2020

12

1 reference

Europe PubMed Central

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2 June 2020

10

1 reference

Europe PubMed Central

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2 June 2020

e1005135

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27716836%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

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Creative Commons Attribution 4.0 International

7 October 2016

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April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

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Cytoscape

2 references

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Neighborhood Regularized Logistic Matrix Factorization for Drug-Target Interaction Prediction

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19 March 2017

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19 March 2017

Why is Tanimoto index an appropriate choice for fingerprint-based similarity calculations?

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Raloxifene attenuates Pseudomonas aeruginosa pyocyanin production and virulence

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Drug discovery using chemical systems biology: weak inhibition of multiple kinases may contribute to the anti-cancer effect of nelfinavir

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A multidimensional strategy to detect polypharmacological targets in the absence of structural and sequence homology

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19 March 2017

Drug discovery using chemical systems biology: repositioning the safe medicine Comtan to treat multi-drug and extensively drug resistant tuberculosis

1 reference

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Drug discovery using chemical systems biology: identification of the protein-ligand binding network to explain the side effects of CETP inhibitors

1 reference

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19 March 2017

Cytoscape: a software environment for integrated models of biomolecular interaction networks

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19 March 2017

An efficient algorithm for large-scale detection of protein families

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19 March 2017

Novel computational approaches to polypharmacology as a means to define responses to individual drugs

1 reference

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23 March 2017

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7 April 2017

ZINC: a free tool to discover chemistry for biology

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7 April 2017

Relating protein pharmacology by ligand chemistry

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7 April 2017

Feasibility of Active Machine Learning for Multiclass Compound Classification

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29 September 2017

Improving compound-protein interaction prediction by building up highly credible negative samples

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29 September 2017

Albumin nanoparticles increase the anticancer efficacy of albendazole in ovarian cancer xenograft model

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29 September 2017

The Comparative Toxicogenomics Database's 10th year anniversary: update 2015.

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29 September 2017

CUSP9* treatment protocol for recurrent glioblastoma: aprepitant, artesunate, auranofin, captopril, celecoxib, disulfiram, itraconazole, ritonavir, sertraline augmenting continuous low dose temozolomide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5055357

29 September 2017

Activity cliffs in drug discovery: Dr Jekyll or Mr Hyde?

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29 September 2017

Repositioning of the anthelmintic drug mebendazole for the treatment for colon cancer

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29 September 2017

Anticancer effects of niclosamide in human glioblastoma.

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29 September 2017

Anti-cancer mechanisms of clinically acceptable colchicine concentrations on hepatocellular carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5055357

29 September 2017

In silico target predictions: defining a benchmarking data set and comparison of performance of the multiclass Naïve Bayes and Parzen-Rosenblatt window

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5055357

29 September 2017

A pharmacological organization of G protein-coupled receptors

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29 September 2017

Reducing safety-related drug attrition: the use of in vitro pharmacological profiling.

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29 September 2017

Antiparasitic mebendazole shows survival benefit in 2 preclinical models of glioblastoma multiforme

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29 September 2017

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29 September 2017

Microtubule assembly dynamics: an attractive target for anticancer drugs

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29 September 2017

Mebendazole inhibits growth of human adrenocortical carcinoma cell lines implanted in nude mice

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29 September 2017

Multidimensional chemical genetic analysis of diversity-oriented synthesis-derived deacetylase inhibitors using cell-based assays

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29 September 2017

Mebendazole elicits a potent antitumor effect on human cancer cell lines both in vitro and in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5055357

29 September 2017

Unmasking determinants of specificity in the human kinome.

1 reference

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3 June 2018

Deep neural nets as a method for quantitative structure-activity relationships

1 reference

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3 June 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005135

21 January 2018

Gaussian interaction profile kernels for predicting drug-target interaction.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005135

21 January 2018

Predicting drug-target interactions from chemical and genomic kernels using Bayesian matrix factorization.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005135

21 January 2018

In vitro and in vivo suppression of growth of hepatocellular carcinoma cells by albendazole

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005135

21 January 2018

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21 January 2018

Active learning with support vector machines in the drug discovery process.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005135

21 January 2018

The cost of new drug discovery and development

1 reference

https://pubmed.ncbi.nlm.nih.gov/27716836

12 December 2020

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10.1371/JOURNAL.PCBI.1005135

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27716836%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

DBLP publication ID

journals/ploscb/LimP0THZMX16

1 reference

DBLP Dataset 2021-01-02

28 January 2021

release_hep7kmhnlzbhhlkezsafr3zwqu

1 reference

https://api.fatcat.wiki/v0/release/hep7kmhnlzbhhlkezsafr3zwqu

24 November 2022

based on heuristic

mapped directly with Wikidata item

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27716836%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27716836%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

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