(Q28591877)

31 January 2017

title

The selenocysteine-specific elongation factor contains a novel and multi-functional domain (English)

1 reference

Eukaryotic elongation factor, selenocysteine-tRNA-specific

31 January 2017

main subject

1 reference

GOA release 2020-03-11

1 reference

Paul R. Copeland

4

0 references

author name string

Jonathan N. Gonzalez-Flores

series ordinal

1

1 reference

31 January 2017

Nirupama Gupta

series ordinal

2

1 reference

31 January 2017

Louise W. DeMong

series ordinal

3

1 reference

31 January 2017

language of work or name

English

0 references

publication date

9 November 2012

1 reference

Journal of Biological Chemistry

31 January 2017

published in

1 reference

31 January 2017

volume

287

1 reference

31 January 2017

issue

46

1 reference

31 January 2017

page(s)

38936–38945

1 reference

The Mechanism for Activation of GTP Hydrolysis on the Ribosome

31 January 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Crystal structure of human selenocysteine tRNA

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Protection against reactive oxygen species by selenoproteins

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Position of eukaryotic initiation factor eIF5B on the 80S ribosome mapped by directed hydroxyl radical probing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Structural insight into a molecular switch in tandem winged-helix motifs from elongation factor SelB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Structural basis for dynamic interdomain movement and RNA recognition of the selenocysteine-specific elongation factor SelB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

An improved definition of the RNA-binding specificity of SECIS-binding protein 2, an essential component of the selenocysteine incorporation machinery

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Class-1 release factor eRF1 promotes GTP binding by class-2 release factor eRF3

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Characterization of the SECIS binding protein 2 complex required for the co-translational insertion of selenocysteine in mammals

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Structure of prokaryotic SECIS mRNA hairpin and its interaction with elongation factor SelB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB.

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Mammalian selenoprotein in which selenocysteine (Sec) incorporation is supported by a new form of Sec insertion sequence element

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

The selenocysteine incorporation machinery: interactions between the SECIS RNA and the SECIS-binding protein SBP2

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Initiation factor IF 2 binds to the alpha-sarcin loop and helix 89 of Escherichia coli 23S ribosomal RNA.

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Decoding apparatus for eukaryotic selenocysteine insertion

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Characterization of mSelB, a novel mammalian elongation factor for selenoprotein translation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

A novel RNA binding protein, SBP2, is required for the translation of mammalian selenoprotein mRNAs

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Functional characterization of the eukaryotic SECIS elements which direct selenocysteine insertion at UGA codons

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Selenocysteine insertion sequence (SECIS)-binding protein 2 alters conformational dynamics of residues involved in tRNA accommodation in 80 S ribosomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Novel structural determinants in human SECIS elements modulate the translational recoding of UGA as selenocysteine

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

SECISaln, a web-based tool for the creation of structure-based alignments of eukaryotic SECIS elements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

The many applications of acid urea polyacrylamide gel electrophoresis to studies of tRNAs and aminoacyl-tRNA synthetases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Structural studies of elongation and release factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

The L7Ae RNA binding motif is a multifunctional domain required for the ribosome-dependent Sec incorporation activity of Sec insertion sequence binding protein 2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Selenoprotein expression is regulated at multiple levels in prostate cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Cell-free protein synthesis system prepared from insect cells by freeze-thawing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Size matters: a view of selenocysteine incorporation from the ribosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

How can elongation factors EF-G and EF-Tu discriminate the functional state of the ribosome using the same binding site?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Selenocysteine tRNA-specific elongation factor SelB is a structural chimaera of elongation and initiation factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Efficiency of mammalian selenocysteine incorporation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Interaction of translation factor SELB with the formate dehydrogenase H selenopolypeptide mRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Thermodynamics of the GTP-GDP-operated conformational switch of selenocysteine-specific translation factor SelB.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Thermodynamic and kinetic framework of selenocysteyl-tRNASec recognition by elongation factor SelB

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Evolutionary history of selenocysteine incorporation from the perspective of SECIS binding proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

A novel protein domain induces high affinity selenocysteine insertion sequence binding and elongation factor recruitment

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Domain structure of the prokaryotic selenocysteine-specific elongation factor SelB.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Coupled tRNA(Sec)-dependent assembly of the selenocysteine decoding apparatus

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M112.415463

Structural rearrangements of the ribosome at the tRNA proofreading step

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M112.415463

[Interaction of 23S ribosomal RNA helices 89 and 91 of Escherichia coli contributes to the activity of IF2 but is insignificant for elongation factors functioning]

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3493934

Selenocysteine inserting RNA elements modulate GTP hydrolysis of elongation factor SelB

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/22992746

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Structural basis for mRNA recognition by elongation factor SelB

1 reference

https://pubmed.ncbi.nlm.nih.gov/22992746