(Q28607475)

31

0 references

Ludovic Orlando

4

0 references

Mait Metspalu

19

Christian Moliin Outzen Kapel

Mait Metspalu

0 references

10

Christian Moliin Outzen Kapel

0 references

Thomas Sicheritz-Ponten

26

Thomas Sicheritz-Pontén

0 references

Mikkel Schubert

Mikkel Schubert

8

0 references

Martin Sikora

Martin Sikora

5

0 references

Marta Mirazón Lahr

Marta Mirazón Lahr

28

0 references

Rasmus Nielsen

Rasmus Nielsen

29

0 references

Kasper Nielsen

Kasper Nielsen

3

0 references

Andrey Epimakhov

Andrey Epimakhov

14

0 references

Karl-Göran Sjögren

Karl-Göran Sjögren

6

0 references

Anders Gorm Pedersen

Anders Gorm Pedersen

7

0 references

Kristian Kristiansen

30

Kristian Kristiansen

0 references

Simon Rasmussen

Simon Rasmussen

1

0 references

Morten Allentoft

Morten Erik Allentoft

2

0 references

Lehti Saag

Lehti Saag

23

0 references

Levon Yepiskoposyan

25

Levon Yepiskoposyan

0 references

Dalia Pokutta

22

Dalia Pokutta

0 references

Liivi Varul

24

Liivi Varul

0 references

author name string

Alex Van Dam

9

0 references

Henrik Bjørn Nielsen

11

0 references

Pavel Avetisyan

13

0 references

Mikhail Viktorovich Khalyapin

15

0 references

Artak Gnuni

16

0 references

Aivar Kriiska

17

0 references

Irena Lasak

18

0 references

Vyacheslav Moiseyev

20

0 references

Andrei Gromov

21

0 references

Robert A Foley

Massive migration from the steppe was a source for Indo-European languages in Europe

27

0 references

language of work or name

English

0 references

publication date

22 October 2015

0 references

published in

Cell

0 references

volume

163

0 references

issue

3

0 references

page(s)

571-82

0 references

cites work

1 reference

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BEAST 2: a software platform for Bayesian evolutionary analysis

17 March 2017

1 reference

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Yersinia pestis DNA from skeletal remains from the 6(th) century AD reveals insights into Justinianic Plague

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

The half-life of DNA in bone: measuring decay kinetics in 158 dated fossils

17 March 2017

1 reference

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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

A draft genome of Yersinia pestis from victims of the Black Death

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

The Sequence Alignment/Map format and SAMtools

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Fast and accurate short read alignment with Burrows-Wheeler transform

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

17 March 2017

1 reference

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Microevolution and history of the plague bacillus, Yersinia pestis

17 March 2017

1 reference

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Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Genome sequence of Yersinia pestis, the causative agent of plague

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

The innate immune response to bacterial flagellin is mediated by Toll-like receptor 5

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Detection of 400-year-old Yersinia pestis DNA in human dental pulp: an approach to the diagnosis of ancient septicemia

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

jModelTest 2: more models, new heuristics and parallel computing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

BEDTools: a flexible suite of utilities for comparing genomic features

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Circos: an information aesthetic for comparative genomics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Illumina sequencing library preparation for highly multiplexed target capture and sequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Yersinia pestis--etiologic agent of plague

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Early emergence of Yersinia pestis as a severe respiratory pathogen

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Population genomics of Bronze Age Eurasia

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Second-generation PLINK: rising to the challenge of larger and richer datasets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Retracing the evolutionary path that led to flea-borne transmission of Yersinia pestis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Yersinia pestis and the plague of Justinian 541-543 AD: a genomic analysis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Regional population collapse followed initial agriculture booms in mid-Holocene Europe

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

AdapterRemoval: easy cleaning of next-generation sequencing reads

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

A rationale for repression and/or loss of motility by pathogenic Yersinia in the mammalian host

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Role of the Yersinia pestis plasminogen activator in the incidence of distinct septicemic and bubonic forms of flea-borne plague

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

The evolution of flea-borne transmission in Yersinia pestis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Role of Yersinia murine toxin in survival of Yersinia pestis in the midgut of the flea vector

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Molecular insights into the history of plague

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Complete DNA sequence and detailed analysis of the Yersinia pestis KIM5 plasmid encoding murine toxin and capsular antigen

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Structural organization of virulence-associated plasmids of Yersinia pestis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

Genome plasticity in Yersinia pestis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

A surface protease and the invasive character of plague

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4644222

10.1016/J.CELL.2015.10.009

3 June 2018

Identifiers

DOI

1 reference

316928

316928

1 reference

1 reference

1 reference