(Q28652352)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

title

High-resolution hepatitis C virus subtyping using NS5B deep sequencing and phylogeny, an alternative to current methods (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Josep Gregori

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

Francisco Rodríguez-Frías

22 February 2020

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Sofía Pérez-del-Pulgar

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Damir Garcia-Cehic

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Rosario Casillas

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

David Tabernero

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Andrea Caballero

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Esteban Domingo Solans

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Leonardo Nieto

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Sabela Lens

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Carlos Briones

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Celia Perales

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Lluís Castells

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Rosario López-Rodríguez

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Manuel Romero-Gomez

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

4

Maria Buti

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

39

Rafael Esteban

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

5

Antonio Madejon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Miguel Alvarez-Tejado

12

Miguel Alvarez-Tejado

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

18

Irene Belmonte

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Paloma Muñoz-de-Rueda

21

Paloma Muñoz-de-Rueda

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

22

Paloma Sanz-Cameno

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Silvia Sauleda Oliveras

23

Silvia Sauleda

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

24

Marta Bes

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

30

Lluis Viladomiu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

31

Javier Salmeron

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

Ángeles O Angela Ruiz-Extremera

22 February 2020

32

Angela Ruiz-Extremera

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

33

Rosa Quiles-Pérez

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

34

Ricardo Moreno-Otero

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

36

Helena Allende

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

38

Jaume Guardia

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Javier García-Samaniego

40

Javier Garcia-Samaniego

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

41

Xavier Forns

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

28

Julie Sheldon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

author name string

Maria Blasi

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Maria Homs

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Jose Manuel Muñoz

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Maria Cubero

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Jose Antonio del Campo

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Jordi Gomez

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Juan Ignacio Esteban

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

language of work or name

English

0 references

publication date

5 November 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

Journal of Clinical Microbiology

22 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

volume

53

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

page(s)

219-226

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

HCV genotypes are differently prone to the development of resistance to linear and macrocyclic protease inhibitors

22 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Hepatitis C Virus (HCV) Genotype 1 Subtype Identification in New HCV Drug Development and Future Clinical Practice

17 March 2017

1 reference

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Naturally occurring dominant resistance mutations to hepatitis C virus protease and polymerase inhibitors in treatment-naïve patients

17 March 2017

1 reference

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Evaluation of Versant Hepatitis C Virus Genotype Assay (LiPA) 2.0

17 March 2017

1 reference

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Use of Sequence Analysis of the NS5B Region for Routine Genotyping of Hepatitis C Virus with Reference to C/E1 and 5' Untranslated Region Sequences

17 March 2017

1 reference

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Improvement of Hepatitis C Virus (HCV) Genotype Determination with the New Version of the INNO-LiPA HCV Assay

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Genotyping Hepatitis C Viruses from Southeast Asia by a Novel Line Probe Assay That Simultaneously Detects Core and 5' Untranslated Regions

17 March 2017

1 reference

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Sofosbuvir for hepatitis C genotype 2 or 3 in patients without treatment options

17 March 2017

1 reference

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Avoiding false positives with PCR

7 April 2017

1 reference

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ABT-450/r-ombitasvir and dasabuvir with ribavirin for hepatitis C with cirrhosis

7 April 2017

1 reference

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Evaluation of the Abbott realtime HCV genotype II RUO (GT II) assay with reference to 5'UTR, core and NS5B sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Simeprevir with peginterferon and ribavirin leads to high rates of SVR in patients with HCV genotype 1 who relapsed after previous therapy: a phase 3 trial

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Importance of HCV genotype 1 subtypes for drug resistance and response to therapy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Multiple hepatitis C virus (HCV) reinfections in HIV-positive men who have sex with men: no influence of HCV genotype switch or interleukin-28B genotype on spontaneous clearance

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

All-oral combination of ledipasvir, vedroprevir, tegobuvir, and ribavirin in treatment-naïve patients with genotype 1 HCV infection

3 June 2018

1 reference

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Genetic background for development of resistance mutations within the HCV NS3 protease-helicase in direct acting antiviral naive patients

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Phase 2b trial of interferon-free therapy for hepatitis C virus genotype 1.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Inference with viral quasispecies diversity indices: clonal and NGS approaches

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Naturally occurring resistance mutations to inhibitors of HCV NS5A region and NS5B polymerase in DAA treatment-naïve patients

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Differential sensitivity of 5'UTR-NS5A recombinants of hepatitis C virus genotypes 1-6 to protease and NS5A inhibitors

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Faldaprevir and deleobuvir for HCV genotype 1 infection.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Eradication of hepatitis C infection: the importance of targeting people who inject drugs.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Hepatitis C virus reinfection incidence and treatment outcome among HIV-positive MSM.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Accuracy of a commercially available assay for HCV genotyping and subtyping in the clinical practice.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Implications of baseline polymorphisms for potential resistance to NS3 protease inhibitors in Hepatitis C virus genotypes 1a, 2b and 3a.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Sequencing assays for failed genotyping with the versant hepatitis C virus genotype assay (LiPA), version 2.0.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Hepatitis C virus treatment for prevention among people who inject drugs: Modeling treatment scale-up in the age of direct-acting antivirals

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Hepatitis C virus subtyping based on sequencing of the C/E1 and NS5B genomic regions in comparison to a commercially available line probe assay.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Resistance analysis of hepatitis C virus genotype 1 prior treatment null responders receiving daclatasvir and asunaprevir

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Comparison of three different HCV genotyping methods: core, NS5B sequence analysis and line probe assay

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Whole genome pyrosequencing of rare hepatitis C virus genotypes enhances subtype classification and identification of naturally occurring drug resistance variants.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Evaluation of two hepatitis C virus genotyping assays based on the 5' untranslated region (UTR): the limitations of 5' UTR-based assays and the need for a supplementary sequencing-based approach

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Prevalence of hepatitis C virus variants resistant to NS3 protease inhibitors or the NS5A inhibitor (BMS-790052) in hepatitis patients with genotype 1b.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Hepatitis C virus reinfection and superinfection among treated and untreated participants with recent infection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Genetic recombination of the hepatitis C virus: clinical implications

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Evidence of intense ongoing endemic transmission of hepatitis C virus in Egypt

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Hepatitis C virus recombinants are rare even among intravenous drug users.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

Resistance to direct antiviral agents in patients with hepatitis C virus infection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4290919

The presence of resistance mutations to protease and polymerase inhibitors in Hepatitis C virus sequences from the Los Alamos databank

3 June 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

A boceprevir failure in a patient infected with HCV genotype 1g: importance and limitations of virus genotyping prior to HCV protease-inhibitor-based therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

Natural prevalence of NS5A polymorphisms in subjects infected with hepatitis C virus genotype 3 and their effects on the antiviral activity of NS5A inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

Frequent multiple hepatitis C virus infections among injection drug users in a prison setting

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

Frequent HCV reinfection and superinfection in a cohort of injecting drug users in Amsterdam

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

A comprehensive system for consistent numbering of HCV sequences, proteins and epitopes

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

[Hepatitis C virus genotyping: comparison of the Abbott RealTime HCV Genotype II assay and NS5B sequencing].

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

Natural variability of NS3 protease in patients infected with genotype 4 hepatitis C virus (HCV): implications for antiviral treatment using specifically targeted antiviral therapy for HCV.

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

NS3 protease polymorphism and natural resistance to protease inhibitors in French patients infected with HCV genotypes 1-5.

21 January 2018

1 reference

https://api.crossref.org/works/10.1128%2FJCM.02093-14

21 January 2018

Identifiers

DOI

10.1128/JCM.02093-14

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25378574%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

PubMed publication ID

25378574

2 references