(Q28661179)

Creative Commons Attribution 3.0 Unported

volume

2013

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page(s)

701317

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copyright license

start time

1 January 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

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iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition

17 March 2017

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iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties

17 March 2017

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iNR-PhysChem: a sequence-based predictor for identifying nuclear receptors and their subfamilies via physical-chemical property matrix

17 March 2017

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Open Babel: An open chemical toolbox

17 March 2017

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Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching

17 March 2017

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The structural basis for intramembrane assembly of an activating immunoreceptor complex

17 March 2017

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Predicting drug-target interaction networks based on functional groups and biological features

17 March 2017

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Solution structure and functional analysis of the influenza B proton channel

17 March 2017

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Mechanism of drug inhibition and drug resistance of influenza A M2 channel

17 March 2017

1 reference

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Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

17 March 2017

1 reference

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Structure and mechanism of the M2 proton channel of influenza A virus

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Recent progress in protein subcellular location prediction

17 March 2017

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17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

17 March 2017

1 reference

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The ENZYME database in 2000

17 March 2017

1 reference

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H 2 CO 3 as substrate for carbonic anhydrase in the dehydration of HCO 3

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Studies on the rate of diffusion-controlled reactions of enzymes. Spatial factor and force field factor

17 March 2017

1 reference

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The kinetics of the combination reaction between enzyme and substrate

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Iterated profile searches with PSI-BLAST--a tool for discovery in protein databases

7 April 2017

1 reference

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Signal propagation in protein interaction network during colorectal cancer progression

7 April 2017

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Some remarks on predicting multi-label attributes in molecular biosystems

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

propy: a tool to generate various modes of Chou's PseAAC.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Identifying protein quaternary structural attributes by incorporating physicochemical properties into the general form of Chou's PseAAC via discrete wavelet transform.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of allergenic proteins by means of the concept of Chou's pseudo amino acid composition and a machine learning approach

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Predicting antibacterial peptides by the concept of Chou's pseudo-amino acid composition and machine learning methods

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Identification of colorectal cancer related genes with mRMR and shortest path in protein-protein interaction network

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

PseAAC-Builder: a cross-platform stand-alone program for generating various special Chou's pseudo-amino acid compositions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Identifying GPCRs and their types with Chou's pseudo amino acid composition: an approach from multi-scale energy representation and position specific scoring matrix

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Discriminating outer membrane proteins with Fuzzy K-nearest Neighbor algorithms based on the general form of Chou's PseAAC.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of metalloproteinase family based on the concept of Chou's pseudo amino acid composition using a machine learning approach

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Identifying bacterial virulent proteins by fusing a set of classifiers based on variants of Chou's pseudo amino acid composition and on evolutionary information

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Indexing molecules with chemical graph identifiers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of GABAA receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Some remarks on protein attribute prediction and pseudo amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Supersecondary structure prediction using Chou's pseudo amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Drug-target interaction prediction from chemical, genomic and pharmacological data in an integrated framework

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of cyclin proteins using Chou's pseudo amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of drug-target interaction networks from the integration of chemical and genomic spaces.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Combing ontologies and dipeptide composition for predicting DNA-binding proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Genetic programming for creating Chou's pseudo amino acid based features for submitochondria localization

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Using the concept of Chou's pseudo amino acid composition to predict protein subcellular localization: an approach by incorporating evolutionary information and von Neumann entropies

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

PseAAC: a flexible web server for generating various kinds of protein pseudo amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Using pseudo amino acid composition to predict protein structural class: approached by incorporating 400 dipeptide components.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Inhibitor design for SARS coronavirus main protease based on "distorted key theory".

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of protein subcellular localization by support vector machines using multi-scale energy and pseudo amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A new sequence representation as applied in better specificity elucidation for human immunodeficiency virus type 1 protease

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Comparative study of the physicochemical properties of six clinical low molecular weight gadolinium contrast agents

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Progress in computational approach to drug development against SARS.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

NMR studies on how the binding complex of polyisoprenol recognition sequence peptides and polyisoprenols can modulate membrane structure

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Synthesis and activity of an octapeptide inhibitor designed for SARS coronavirus main proteinase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

The structure of phospholamban pentamer reveals a channel-like architecture in membranes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Molecular modeling and chemical modification for finding peptide inhibitor against severe acute respiratory syndrome coronavirus main proteinase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Structural bioinformatics and its impact to biomedical science

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A guide to drug discovery: Target selection in drug discovery

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Subcellular location prediction of apoptosis proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of protein cellular attributes using pseudo-amino acid composition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

On the complexity measures of genetic sequences.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

An intriguing controversy over protein structural class prediction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Relation between amino acid composition and cellular location of proteins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of human immunodeficiency virus protease cleavage sites in proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Predicting cleavability of peptide sequences by HIV protease via correlation-angle approach

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A vectorized sequence-coupling model for predicting HIV protease cleavage sites in proteins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Predicting protein folding types by distance functions that make allowances for amino acid interactions.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Prediction of Protein Structural Classes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A novel approach to predicting protein structural classes in a (20-1)-D amino acid composition space

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

The convergence-divergence duality in lectin domains of selectin family and its implications

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Signal detectability: the use of ROC curves and their analyses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

A cumulative specificity model for proteases from human immunodeficiency virus types 1 and 2, inferred from statistical analysis of an extended substrate data base

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Structure-based maximal affinity model predicts small-molecule druggability.

3 June 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

A fast flexible docking method using an incremental construction algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Binding mechanism of coronavirus main proteinase with ligands and its implication to drug design against SARS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

An in-depth analysis of the biological functional studies based on the NMR M2 channel structure of influenza A virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Energetic analysis of the two controversial drug binding sites of the M2 proton channel in influenza A virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Coupling interaction between thromboxane A2 receptor and alpha-13 subunit of guanine nucleotide-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Insights from modeling three-dimensional structures of the human potassium and sodium channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

iLoc-Animal: a multi-label learning classifier for predicting subcellular localization of animal proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

iAMP-2L: a two-level multi-label classifier for identifying antimicrobial peptides and their functional types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

iLoc-Hum: using the accumulation-label scale to predict subcellular locations of human proteins with both single and multiple sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Unsupervised Data Base Clustering Based on Daylight's Fingerprint and Tanimoto Similarity: A Fast and Automated Way To Cluster Small and Large Data Sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Discrimination of intracellular and extracellular proteins using amino acid composition and residue-pair frequencies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

A multilabel model based on Chou's pseudo-amino acid composition for identifying membrane proteins with both single and multiple functional types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

EuLoc: a web-server for accurately predict protein subcellular localization in eukaryotes by incorporating various features of sequence segments into the general form of Chou's PseAAC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Using pair-coupled amino acid composition to predict protein secondary structure content.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Prediction of protein secondary structure content.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Classification of nuclear receptors based on amino acid composition and dipeptide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Two-intermediate model to characterize the structure of fast-folding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

GPCR-2L: predicting G protein-coupled receptors and their types by hybridizing two different modes of pseudo amino acid compositions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Quat-2L: a web-server for predicting protein quaternary structural attributes

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Using supervised fuzzy clustering to predict protein structural classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Using subsite coupling to predict signal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Prediction of protein signal sequences and their cleavage sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Prediction of signal peptides using scaled window

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

Use of receiver operating characteristic (ROC) analysis to evaluate sequence matching

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F701317

An information-theoretic approach to the prediction of protein structural class.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

Understanding the recognition of protein structural classes by amino acid composition

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3858977

27 November 2018

1 reference

12 December 2020

Application of novel atom-type AI topological indices to QSPR studies of alkanes

1 reference

12 December 2020

The KEGG databases and tools facilitating omics analysis: latest developments involving human diseases and pharmaceuticals

1 reference

12 December 2020

Methods for computer-aided chemical biology. Part 2: Evaluation of compound selectivity using 2D molecular fingerprints

1 reference

12 December 2020

The folding type of a protein is relevant to the amino acid composition

1 reference

12 December 2020

Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on

1 reference

COCI

https://opencitations.net/index/api/v1/citations/10.1186/1758-2946-3-37

18 January 2024

Identifiers

DOI

10.1155/2013/701317

1 reference

1 reference

1 reference

PubMed publication ID

24371828

1 reference