(Q28684802)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

title

RNA-seq analysis of single bovine blastocysts (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

1 reference

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

author name string

James L Chitwood

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

German G Kaiser

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Juan F Medrano

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Pablo J Ross

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

language of work or name

English

0 references

publication date

25 May 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

volume

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

issue

1

0 references

page(s)

350

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

Critical evaluation of imprinted gene expression by RNA-Seq: a new perspective

1 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Microarrays, deep sequencing and the true measure of the transcriptome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Rfam: Wikipedia, clans and the "decimal" release

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

High-resolution analysis of parent-of-origin allelic expression in the mouse brain

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

The transcription factor TCFAP2C/AP-2gamma cooperates with CDX2 to maintain trophectoderm formation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Galaxy: a web-based genome analysis tool for experimentalists

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Mapping and quantifying mammalian transcriptomes by RNA-Seq

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

The transcriptional landscape of the yeast genome defined by RNA sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

The imprinted gene and parent-of-origin effect database now includes parental origin of de novo mutations

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Increased DNA microarray hybridization specificity using sscDNA targets

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Galaxy: a platform for interactive large-scale genome analysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Understanding alternative splicing: towards a cellular code

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Next-generation sequencing of human mitochondrial reference genomes uncovers high heteroplasmy frequency

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Estimating the effect of SNP genotype on quantitative traits from pooled DNA samples

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

RNA-Seq analysis uncovers transcriptomic variations between morphologically similar in vivo- and in vitro-derived bovine blastocysts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Transcriptional profiling of bovine milk using RNA sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

De novo assembly of expressed transcripts and global analysis of the Phalaenopsis aphrodite transcriptome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Whole-transcriptome RNAseq analysis from minute amount of total RNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Deterministic and stochastic allele specific gene expression in single mouse blastomeres

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Sequencing and characterization of the guppy (Poecilia reticulata) transcriptome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Comparison of transcriptomic landscapes of bovine embryos using RNA-Seq

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Genome-wide association and genomic selection in animal breeding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

SNP discovery in the bovine milk transcriptome using RNA-Seq technology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Analysis and design of RNA sequencing experiments for identifying isoform regulation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Sex determines the expression level of one third of the actively expressed genes in bovine blastocysts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Gata3 regulates trophoblast development downstream of Tead4 and in parallel to Cdx2.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

RNA pre-amplification enables large-scale RT-qPCR gene-expression studies on limiting sample amounts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Global survey of genomic imprinting by transcriptome sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Highly effective SNP-based association mapping and management of recessive defects in livestock

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Mammalian Grb2 regulates multiple steps in embryonic development and malignant transformation.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Heteroplasmy Suggests Limited Biparental Inheritance of Mytilus Mitochondrial DNA

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Genome-wide association studies for feedlot and growth traits in cattle.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

Housekeeping gene transcript abundance in bovine fertilized and cloned embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

The dynamics of gene products fluctuation during bovine pre-hatching development

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

Revealing the bovine embryo transcript profiles during early in vivo embryonic development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

Novel isothermal, linear nucleic acid amplification systems for highly multiplexed applications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

RNA sequencing reveals novel gene clusters in bovine conceptuses associated with maternal recognition of pregnancy and implantation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

Exploration of relationships between production and fertility traits in dairy cattle via association studies of SNPs within candidate genes derived by expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-350

Activation of bovine somatic cell nuclear transfer embryos by PLCZ cRNA injection

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3668197

Variants in the pregnancy-associated plasma protein-A2 gene on Bos taurus autosome 16 are associated with daughter calving ease and productive life in Holstein cattle

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23705625

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Linear mRNA amplification from as little as 5 ng total RNA for global gene expression analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23705625

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-14-350

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

1 March 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-14-350

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

PubMed publication ID

23705625

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23705625%20AND%20SRC:MED&resulttype=core&format=json