(Q28730462)

2

0 references

Saravanaraj Ayyampalayam

3

0 references

Yuannian Jiao

Yuannian Jiao

1

0 references

Norman J. Wickett

Norman J Wickett

10

0 references

Joseph Christopher Pires

J Chris Pires

22

0 references

John E. Bowers

John E Bowers

4

0 references

Jun Wang

Jun Wang

13

0 references

Pamela S. Soltis

19

Pamela S Soltis

0 references

Xiaolei Wu

Xiaolei Wu

11

0 references

Douglas E. Soltis

24

Douglas E Soltis

0 references

Claude W dePamphilis

25

Claude W Depamphilis

0 references

Michael R. McKain

5

Michael R McKain

0 references

Andre S Chanderbali

18

Andre S Chanderbali

0 references

Michael Deyholos

16

Michael K Deyholos

0 references

Dennis William Stevenson

20

Dennis W Stevenson

0 references

Eric K Wafula

9

Eric Wafula

0 references

Joel R. McNeal

6

Joel McNeal

0 references

Megan M Rolf

7

Megan Rolf

0 references

Yeting Zhang

14

Yeting Zhang

0 references

Eric J Carpenter

15

Eric J Carpenter

0 references

author name string

Daniel R Ruzicka

8

0 references

Yong Zhang

12

0 references

Toni M Kutchan

17

0 references

Richard McCombie

describes a project that uses

21

0 references

language of work or name

English

0 references

publication date

26 January 2012

0 references

published in

Genome Biology

0 references

volume

13

0 references

issue

1

0 references

page(s)

R3

0 references

MIRA

MIRA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

The genome of the mesopolyploid crop species Brassica rapa

1 reference

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Genome sequence and analysis of the tuber crop potato

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The genome of woodland strawberry (Fragaria vesca)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Conservation and canalization of gene expression during angiosperm diversification accompany the origin and evolution of the flower

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Paleopolyploidy in the Brassicales: analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

De novo assembly of human genomes with massively parallel short read sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Archiving next generation sequencing data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Rosid radiation and the rapid rise of angiosperm-dominated forests

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

How to summarize estimates of ancestral divergence times

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Gene duplication: a drive for phenotypic diversity and cause of human disease

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The TIGR Plant Transcript Assemblies database

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Widespread genome duplications throughout the history of flowering plants

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Two rounds of whole genome duplication in the ancestral vertebrate

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Identifying the Basal Angiosperm Node in Chloroplast Genome Phylogenies: Sampling One's Way Out of the Felsenstein Zone

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Polyploidy and genome evolution in plants

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Duplication and Diversification in the APETALA1/FRUITFULL Floral Homeotic Gene Lineage: Implications for the Evolution of Floral Development

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

PAML: a program package for phylogenetic analysis by maximum likelihood

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Multiple sequence alignment using ClustalW and ClustalX

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock

7 April 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

7 April 2017

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Polyploidy and angiosperm diversification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Ancestral polyploidy in seed plants and angiosperms

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Recently formed polyploid plants diversify at lower rates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Floral variation and floral genetics in basal angiosperms

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Angiosperm phylogeny: 17 genes, 640 taxa

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Genome duplication and the origin of angiosperms

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

From 2R to 3R: evidence for a fish-specific genome duplication (FSGD).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

A unique set of 11,008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

Genome duplication, divergent resolution and speciation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3334584

The origins of genomic duplications in Arabidopsis.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

Synteny and Collinearity in Plant Genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

The monosaccharide transporter gene family in Arabidopsis and rice: a history of duplications, adaptive evolution, and functional divergence

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

Comparative genomic analyses in Asparagus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2012-13-1-R3

Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22280555

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Origin of Interspecific Genomic Incompatibility via Gene Duplication

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22280555

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2012-13-1-R3

1 reference

Dimensions Publication ID

1046733970

0 references

1 reference

1 reference

PubMed publication ID

22280555

1 reference