(Q28741917)

Gly-Ile-Ala-Gly-Ala(thiazol-4-yl)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62387

1 reference

Gly-Gln-Ala-Gly-Phe-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62388

1 reference

Gly-Hle-Ala-Gly-Ala(thiazol-4-yl)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62402

1 reference

Gly-Chg-Ala-Gly-Tyr-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62391

1 reference

Gly-Hle-Ala-Gly-Cha-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62396

1 reference

Gly-Ile-Ala-Gly-Phe(4-F)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62390

1 reference

Gly-Chg-Ala-Gly-Ala(4-Py)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62386

1 reference

Gly-Gln-Ala-Gly-Tyr-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62397

1 reference

Gly-Cpa-Ala-Gly-Ala(4-Py)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62403

1 reference

Gly-Aic-Ala-Gly-Cha-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62394

1 reference

Gly-Ala(thiazol-4-yl)-Ala-Gly-Ala(4-Py)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62404

1 reference

Gly-Cpa-Ala-Gly-Cha-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62400

1 reference

1 reference

Gly-Ala(thiazol-4-yl)-Ala-Gly-Phe-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62385

1 reference

Gly-Gln-Ala-Gly-Ala(thiazol-4-yl)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62398

1 reference

Gly-Aic-Ala-Gly-Phe-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62401

1 reference

Gly-Chg-Ala-Gly-Phe(3-Me)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62405

1 reference

Gly-Cpa-Ala-Gly-Phe(3-Me)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62395

1 reference

Gly-Ala(thiazol-4-yl)-Ala-Gly-Phe(3-Me)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62392

1 reference

Gly-Hle-Ala-Gly-Phe(4-F)-Lys(5-GalO)-Gly-Glu-Gln-Gly-Pro-Lys-Gly-Glu-Thr

62399

1 reference

Tsvetelina Batsalova

3

0 references

Balik Dzhambazov

object named as

Balik Dzhambazov

4

0 references

author name string

Ida E Andersson

1

0 references

C David Andersson

2

0 references

Rikard Holmdahl

5

0 references

Jan Kihlberg

6

0 references

Anna Linusson

Creative Commons Attribution 4.0 International

7

0 references

language of work or name

English

0 references

publication date

15 March 2011

0 references

published in

PLOS One

0 references

volume

6

0 references

page(s)

e17881

0 references

issue

3

0 references

copyright license

start time

15 March 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Exploration of the P6/P7 region of the peptide-binding site of the human class II major histocompatability complex protein HLA-DR1

17 March 2017

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Gaussian docking functions

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Structural and functional consequences of altering a peptide MHC anchor residue

17 March 2017

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Peptide and peptide mimetic inhibitors of antigen presentation by HLA-DR class II MHC molecules. Design, structure-activity relationships, and X-ray crystal structures

17 March 2017

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X-ray crystal structure of HLA-DR4 (DRA*0101, DRB1*0401) complexed with a peptide from human collagen II

17 March 2017

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The shared epitope hypothesis. An approach to understanding the molecular genetics of susceptibility to rheumatoid arthritis

17 March 2017

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A critical assessment of docking programs and scoring functions

17 March 2017

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Design, synthesis and evaluation of peptide inhibitors of Mycobacterium tuberculosis ribonucleotide reductase.

7 April 2017

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Ligand design by a combinatorial approach based on modeling and experiment: application to HLA-DR4.

20 June 2018

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Quantitative structure-activity relationship of peptides binding to the class II major histocompatibility complex molecule Aq associated with autoimmune arthritis

20 June 2018

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Analog peptides of type II collagen can suppress arthritis in HLA-DR4 (DRB1*0401) transgenic mice.

20 June 2018

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Consensus scoring for protein-ligand interactions

20 June 2018

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Amelioration of established experimental autoimmune encephalomyelitis by an MHC anchor-substituted variant of proteolipid protein 139-151.

20 June 2018

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Multivariate design, synthesis, and biological evaluation of peptide inhibitors of FimC/FimH protein-protein interactions in uropathogenic Escherichia coli

20 June 2018

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Identification of the minimal glycopeptide core recognized by T cells in a model for rheumatoid arthritis.

20 June 2018

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Evaluation and application of multiple scoring functions for a virtual screening experiment

20 June 2018

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Modeling the structure of bound peptide ligands to major histocompatibility complex

20 June 2018

1 reference

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Modification of peptide interaction with MHC creates TCR partial agonists

20 June 2018

1 reference

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Improving structure-based virtual screening by multivariate analysis of scoring data

20 June 2018

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MUC1-derived glycopeptide libraries with improved MHC anchors are strong antigens and prime mouse T cells for proliferative responses to lysates of human breast cancer tissue

20 June 2018

1 reference

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Glycosylation of type II collagen is of major importance for T cell tolerance and pathology in collagen-induced arthritis

20 June 2018

1 reference

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Predominant selection of T cells specific for the glycosylated collagen type II epitope (263-270) in humanized transgenic mice and in rheumatoid arthritis

20 June 2018

1 reference

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Radically altered T cell receptor signaling in glycopeptide-specific T cell hybridoma induced by antigen with minimal differences in the glycan group

20 June 2018

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Detailed analysis of scoring functions for virtual screening

20 June 2018

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Deciphering common failures in molecular docking of ligand-protein complexes.

20 June 2018

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Statistical molecular design of peptoid libraries

20 June 2018

1 reference

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Peptidomimetic compounds that inhibit antigen presentation by autoimmune disease-associated class II major histocompatibility molecules

20 June 2018

1 reference

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Characterization of a peptide analog of a determinant of type II collagen that suppresses collagen-induced arthritis.

20 June 2018

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Definition of MHC and T cell receptor contacts in the HLA-DR4restricted immunodominant epitope in type II collagen and characterization of collagen-induced arthritis in HLA-DR4 and human CD4 transgenic mice.

20 June 2018

1 reference

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Empirical scoring functions: I. The development of a fast empirical scoring function to estimate the binding affinity of ligands in receptor complexes.

20 June 2018

1 reference

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Identification of MHC class II and TCR binding residues in the type II collagen immunodominant determinant mediating collagen-induced arthritis

20 June 2018

1 reference

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A TCR binds to antagonist ligands with lower affinities and faster dissociation rates than to agonists

20 June 2018

1 reference

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Kinetics of T-cell receptor binding to peptide/I-Ek complexes: correlation of the dissociation rate with T-cell responsiveness

20 June 2018

1 reference

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Type II collagen-induced arthritis in mice. I. Major histocompatibility complex (I region) linkage and antibody correlates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058040

Noninvasive continuous monitoring of solid-phase peptide synthesis by acid-base indicator.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058040

Therapeutic vaccination of active arthritis with a glycosylated collagen type II peptide in complex with MHC class II molecules

20 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Glycopeptide specificity of helper T cells obtained in mouse models for rheumatoid arthritis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Probing molecular interactions within class II MHC Aq/glycopeptide/T-cell receptor complexes associated with collagen-induced arthritis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Oxazole-modified glycopeptides that target arthritis-associated class II MHC A(q) and DR4 proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Limited plasticity in T cell recognition of modified T cell receptor contact residues in MHC class II bound peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Predicting binding affinities of protein ligands from three-dimensional models: application to peptide binding to class I major histocompatibility proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Structural mining: self-consistent design on flexible protein-peptide docking and transferable binding affinity potential.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Comparative performance assessment of the conformational model generators omega and catalyst: a large-scale survey on the retrieval of protein-bound ligand conformations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

The Collinearity Problem in Linear Regression. The Partial Least Squares (PLS) Approach to Generalized Inverses

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

PLS-regression: a basic tool of chemometrics

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Epitope glycosylation plays a critical role for T cell recognition of type II collagen in collagen-induced arthritis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Regulation of polyclonal T cell responses by an MHC anchor-substituted variant of myelin oligodendrocyte glycoprotein 35-55.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Ligand recognition by alpha beta T cell receptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

T cell receptor signaling induced by an analog peptide of type II collagen requires activation of Syk.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Principal component analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Analysis of key parameters for molecular dynamics of pMHC molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

Identification of an altered peptide ligand based on the endogenously presented, rheumatoid arthritis-associated, human cartilage glycoprotein-39(263-275) epitope: an MHC anchor variant peptide for immune modulation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058040

Immunisation against heterologous type II collagen induces arthritis in mice

27 November 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0017881

A New Concept for Multidimensional Selection of Ligand Conformations (MultiSelect) and Multidimensional Scoring (MultiScore) of Protein−Ligand Binding Affinities

21 January 2018

1 reference

12 December 2020

Major histocompatibility complex class II binding characteristics of peptoid-peptide hybrids

1 reference

12 December 2020

Peptide-induced suppression of collagen-induced arthritis in HLA-DR1 transgenic mice

1 reference

12 December 2020

Identification of an immunodominant type-II collagen peptide recognized by T cells in H-2q mice: self tolerance at the level of determinant selection

1 reference

12 December 2020

A synthetic peptide analogue of a determinant of type II collagen prevents the onset of collagen-induced arthritis

1 reference

12 December 2020

Exploration of requirements for peptide binding to HLA DRB1*0101 and DRB1*0401

1 reference

12 December 2020

Expression of a transgenic class II Ab gene confers susceptibility to collagen-induced arthritis

1 reference

12 December 2020

The structural basis of MHC control of collagen-induced arthritis; binding of the immunodominant type II collagen 256-270 glycopeptide to H-2Aq and H-2Ap molecules

1 reference

12 December 2020

High- and low-potency ligands with similar affinities for the TCR: the importance of kinetics in TCR signaling

1 reference

12 December 2020

Modeling ligand-receptor interaction for some MHC class II HLA-DR4 peptide mimetic inhibitors using several molecular docking and 3D QSAR techniques

1 reference

12 December 2020

Side-chain and backbone amide bond requirements for glycopeptide stimulation of T-cells obtained in a mouse model for rheumatoid arthritis

1 reference

12 December 2020