(Q28749423)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

The mitochondrial genomes of sponges provide evidence for multiple invasions by Repetitive Hairpin-forming Elements (RHE) (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

Gert Wörheide

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

Dennis V. Lavrov

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1

Dirk Erpenbeck

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

language of work or name

English

0 references

publication date

9 December 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

page(s)

591

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

maintained by WikiProject

15 January 2020

WikiProject Invasion Biology

0 references

cites work

Phylogenomics revives traditional views on deep animal relationships

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The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA

16 March 2017

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Seventeen new complete mtDNA sequences reveal extensive mitochondrial genome evolution within the Demospongiae

16 March 2017

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The mitochondrial genome of the hexactinellid sponge Aphrocallistes vastus: evidence for programmed translational frameshifting

16 March 2017

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The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): high genome plasticity at intra-genus level

16 March 2017

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16 March 2017

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The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs

16 March 2017

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Artemis: sequence visualization and annotation

16 March 2017

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Initiation of protein synthesis in Saccharomyces cerevisiae mitochondria without formylation of the initiator tRNA.

16 March 2017

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Base-calling of automated sequencer traces using phred. II. Error probabilities

16 March 2017

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

16 March 2017

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

16 March 2017

1 reference

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Comparative and functional anatomy of group II catalytic introns--a review

16 March 2017

1 reference

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Basic local alignment search tool

16 March 2017

1 reference

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A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process

16 March 2017

1 reference

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Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Reconstructing ordinal relationships in the Demospongiae using mitochondrial genomic data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Glass sponges and bilaterian animals share derived mitochondrial genomic features: a common ancestry or parallel evolution?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Sequencing complete mitochondrial and plastid genomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

An enhanced MITOMAP with a global mtDNA mutational phylogeny

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

PILER: identification and classification of genomic repeats

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Mitochondrial genomes of two demosponges provide insights into an early stage of animal evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Molecular phylogeny of Demospongiae: implications for classification and scenarios of character evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Unique mitochondrial genome architecture in unicellular relatives of animals

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Deletional bias and the evolution of bacterial genomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

SOAP, cleaning multiple alignments from unstable blocks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Partial sequence of a sponge mitochondrial genome reveals sequence similarity to Cnidaria in cytochrome oxidase subunit II and the large ribosomal RNA subunit

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

The mitochondrial genome of the sea anemone Metridium senile (Cnidaria): introns, a paucity of tRNA genes, and a near-standard genetic code.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

3'-Inverted repeats in plant mitochondrial mRNAs are processing signals rather than transcription terminators

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Post-transcriptional regulation of chloroplast gene expression in Chlamydomonas reinhardtii

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

The Staden sequence analysis package

3 June 2018

1 reference

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Complete DNA sequence coding for the large ribosomal RNA of yeast mitochondria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Nature of an inserted sequence in the mitochondrial gene coding for the 15S ribosomal RNA of yeast

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Highly conserved GC-rich palindromic DNA sequences flank tRNA genes in Neurospora crassa mitochondria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Both the conserved stem-loop and divergent 5'-flanking sequences are required for initiation at the human mitochondrial origin of light-strand DNA replication.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Control of plastid gene expression: 3' inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Preferential recombination between GC clusters in yeast mitochondrial DNA

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

In vivo double-strand breaks occur at recombinogenic G + C-rich sequences in the yeast mitochondrial genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Mitochondrial DNA evolution in the melanogaster species subgroup of Drosophila.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Transcript termini of messenger RNAs in higher plant mitochondria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

In vivo rearrangement of mitochondrial DNA in Saccharomyces cerevisiae

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Mobility of two optional G + C-rich clusters of the var1 gene of yeast mitochondrial DNA

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Key transitions in animal evolution: a mitochondrial DNA perspective.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

A hypercalcified sponge with soft relatives: Vaceletia is a keratose demosponge.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Double-hairpin elements in the mitochondrial DNA of allomyces: evidence for mobility

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

The mitochondrial DNA of Allomyces macrogynus: the complete genomic sequence from an ancestral fungus

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

Palindromic repeated sequences (PRSs) in the mitochondrial genome of rice: evidence for their insertion after divergence of the genus Oryza from the other Gramineae

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800124

RNA 3' ends: formation and function--meeting review

27 November 2018

1 reference

12 December 2020

Putative target sites for mobile G + C rich clusters in yeast mitochondrial DNA: single elements and tandem arrays

1 reference

12 December 2020

The mitochondrial genome of Acropora tenuis (Cnidaria; Scleractinia) contains a large group I intron and a candidate control region

1 reference

12 December 2020

Transfer RNA gene recruitment in mitochondrial DNA

1 reference

12 December 2020

The GC clusters of the mitochondrial genome of yeast and their evolutionary origin

1 reference

12 December 2020

The unusual varl gene of yeast mitochondrial DNA

1 reference

12 December 2020

1 reference

12 December 2020

A GC cluster repeat is a hotspot for mit- macro-deletions in yeast mitochondrial DNA

1 reference

12 December 2020

Mitochondrial genome of Suberites domuncula: palindromes and inverted repeats are abundant in non-coding regions

1 reference

12 December 2020

Mitochondrial diversity of early-branching metazoa is revealed by the complete mt genome of a haplosclerid demosponge

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-10-591

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

15 January 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-591

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20003196%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

20003196

1 reference