(Q28768369)

8

object named as

Yunyu Shi

0 references

author name string

Junjie Xu

1

0 references

Li Wang

3

0 references

Jie Zhou

4

0 references

Hongda Huang

5

0 references

Jihui Wu

6

0 references

Yang Zhong

Proceedings of the National Academy of Sciences of the United States of America

7

0 references

language of work or name

English

0 references

publication date

1 August 2006

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published in

0 references

volume

103

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issue

31

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page(s)

11625-30

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cites work

Solution structure of human SUMO-3 C47S and its binding surface for Ubc9

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Attachment of the ubiquitin-related protein Urm1p to the antioxidant protein Ahp1p

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Urmylation: A Ubiquitin-like Pathway that Functions during Invasive Growth and Budding in Yeast

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Solution structure of ThiS and implications for the evolutionary roots of ubiquitin

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Crystal structure of molybdopterin synthase and its evolutionary relationship to ubiquitin activation

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

A protein conjugation system in yeast with homology to biosynthetic enzyme reaction of prokaryotes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

16 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

16 March 2017

https://api.crossref.org/works/10.1073/PNAS.0604876103

Structure determination of the small ubiquitin-related modifier SUMO-1

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

PAML: a program package for phylogenetic analysis by maximum likelihood

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

MOLMOL: a program for display and analysis of macromolecular structures

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Site-specific phosphorylation of IkappaBalpha by a novel ubiquitination-dependent protein kinase activity

16 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

16 March 2017

https://api.crossref.org/works/10.1073%2FPNAS.0604876103

Protein structure comparison by alignment of distance matrices

23 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Evolution and function of ubiquitin-like protein-conjugation systems

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Three-dimensional structure of the AAH26994.1 protein from Mus musculus, a putative eukaryotic Urm1

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

A superfamily of protein tags: ubiquitin, SUMO and related modifiers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Rapid protein domain assignment from amino acid sequence using predicted secondary structure

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

MAMMOTH (matching molecular models obtained from theory): an automated method for model comparison

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

DIVERGE: phylogeny-based analysis for functional-structural divergence of a protein family.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Functional divergence in the caspase gene family and altered functional constraints: statistical analysis and prediction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Thiamin biosynthesis in Escherichia coli. Identification of ThiS thiocarboxylate as the immediate sulfur donor in the thiazole formation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Pathways of ubiquitin conjugation.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Biosynthesis and processing of the molybdenum cofactors

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

Phylogenetic relationships from three-dimensional protein structures

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1518799

An atlas of protein topology cartoons available on the World-Wide Web.

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0604876103

Statistical methods for testing functional divergence after gene duplication

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16864801

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Use of a database of structural alignments and phylogenetic trees in investigating the relationship between sequence and structural variability among homologous proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16864801

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular anatomy: phyletic relationships derived from three-dimensional structures of proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16864801