(Q28829489)

5

object named as

Phillip I Tarr

0 references

author name string

Molly K Gibson

1

0 references

Bin Wang

2

0 references

Sara Ahmadi

3

0 references

Carey-Ann D Burnham

4

0 references

Barbara B Warner

describes a project that uses

6

0 references

language of work or name

English

0 references

publication date

7 March 2016

0 references

published in

Nature Microbiology

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volume

1

0 references

issue

4

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page(s)

16024

0 references

Cytoscape

1 reference

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Antibiotics, pediatric dysbiosis, and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Pediatric fecal microbiota harbor diverse and novel antibiotic resistance genes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Human gut microbiome viewed across age and geography

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Metagenomic microbial community profiling using unique clade-specific marker genes

16 March 2017

1 reference

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IMG: the Integrated Microbial Genomes database and comparative analysis system

16 March 2017

1 reference

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HMMER web server: interactive sequence similarity searching

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Fast identification and removal of sequence contamination from genomic and metagenomic datasets

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Ab initio gene identification in metagenomic sequences

16 March 2017

1 reference

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QIIME allows analysis of high-throughput community sequencing data

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Role of the gut microbiota in defining human health

16 March 2017

1 reference

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Functional characterization of the antibiotic resistance reservoir in the human microflora

16 March 2017

1 reference

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Trimmomatic: a flexible trimmer for Illumina sequence data

16 March 2017

1 reference

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

UPARSE: highly accurate OTU sequences from microbial amplicon reads

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

7 April 2017

1 reference

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Bad bugs, no drugs: no ESKAPE! An update from the Infectious Diseases Society of America

7 April 2017

1 reference

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Metagenomics: application of genomics to uncultured microorganisms

7 April 2017

1 reference

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High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED.

7 April 2017

1 reference

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Gut resistome development in healthy twin pairs in the first year of life

3 June 2018

1 reference

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Usefulness of two clinical chorioamnionitis definitions in predicting neonatal infectious outcomes: a systematic review

3 June 2018

1 reference

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Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

3 June 2018

1 reference

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Development of the preterm infant gut microbiome: a research priority

3 June 2018

1 reference

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Patterned progression of bacterial populations in the premature infant gut.

3 June 2018

1 reference

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Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology

3 June 2018

1 reference

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Bacterial phylogeny structures soil resistomes across habitats

3 June 2018

1 reference

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Early empiric antibiotic use in preterm infants is associated with lower bacterial diversity and higher relative abundance of Enterobacter.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Low gut microbiota diversity in early infancy precedes asthma at school age.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Novel resistance functions uncovered using functional metagenomic investigations of resistance reservoirs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

The comprehensive antibiotic resistance database.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Gut microbiota of healthy Canadian infants: profiles by mode of delivery and infant diet at 4 months

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

The Cpx stress response confers resistance to some, but not all, bactericidal antibiotics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

The shared antibiotic resistome of soil bacteria and human pathogens

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

International Nosocomial Infection Control Consortium (INICC) report, data summary of 36 countries, for 2004-2009.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Diagnosis and management of clinical chorioamnionitis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Molecular analysis of the gut microbiota of identical twins with Crohn's disease

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Reported medication use in the neonatal intensive care unit: data from a large national data set.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Uncultured soil bacteria are a reservoir of new antibiotic resistance genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Fecal microflora in healthy infants born by different methods of delivery: permanent changes in intestinal flora after cesarean delivery

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5031140

Intestinal microbiota development in preterm neonates and effect of perinatal antibiotics

3 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.24

Nosocomial infections in pediatric intensive care units in the United States. National Nosocomial Infections Surveillance System.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.24

Trends of outpatient prescription drug utilization in US children, 2002-2010.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.24

Comparative metagenomic analyses reveal viral-induced shifts of host metabolism towards nucleotide biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.24

Bad bugs, no drugs: no ESCAPE revisited

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27572443

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NMICROBIOL.2016.24

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

384890

Dimensions Publication ID

1052776941

0 references

OpenCitations bibliographic resource ID

384890

1 reference