(Q28830505)

4

object named as

Mårten Wikström

0 references

author name string

Ruibin Liang

1

0 references

Jessica M J Swanson

2

0 references

Yuxing Peng

Proceedings of the National Academy of Sciences of the United States of America

3

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language of work or name

English

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publication date

5 July 2016

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published in

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volume

113

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issue

27

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page(s)

7420-5

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cites work

Proton-pumping mechanism of cytochrome c oxidase: a kinetic master-equation approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Proton-coupled electron transfer drives the proton pump of cytochrome c oxidase

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Proton pump coupled to cytochrome c oxidase in mitochondria

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Computationally Efficient Multiscale Reactive Molecular Dynamics to Describe Amino Acid Deprotonation in Proteins

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

New perspectives on proton pumping in cellular respiration.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Microscopic basis for kinetic gating in Cytochrome c oxidase: insights from QM/MM analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Proton-coupled electron transfer and the role of water molecules in proton pumping by cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Hydrated Excess Protons Can Create Their Own Water Wires

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Characterizing the proton loading site in cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Computationally Efficient Multiconfigurational Reactive Molecular Dynamics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

A Combined Metadynamics and Umbrella Sampling Method for the Calculation of Ion Permeation Free Energy Profiles

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Multiscale Reactive Molecular Dynamics for Absolute pKa Predictions and Amino Acid Deprotonation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Multiscale simulation reveals a multifaceted mechanism of proton permeation through the influenza A M2 proton channel

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Changing hydration level in an internal cavity modulates the proton affinity of a key glutamate in cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Multiscale reactive molecular dynamics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Exploring the proton pump and exit pathway for pumped protons in cytochrome ba3 from Thermus thermophilus

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Insights into the mechanism of proton transport in cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Proton-transport mechanisms in cytochrome c oxidase revealed by studies of kinetic isotope effects

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Proton-coupled electron transfer in cytochrome oxidase.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Theory of coupled electron and proton transfer reactions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Initiation of the proton pump of cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Quantum Chemical Studies of Proton-Coupled Electron Transfer in Metalloenzymes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Kinetic gating of the proton pump in cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Properties of Arg481 mutants of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides suggest that neither R481 nor the nearby D-propionate of heme a3 is likely to be the proton loading site of the proton pump

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Cytochrome c oxidase: exciting progress and remaining mysteries

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

The proton donor for O-O bond scission by cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Impaired proton pumping in cytochrome c oxidase upon structural alteration of the D pathway

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Mechanism and energetics of proton translocation by the respiratory heme-copper oxidases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Proton solvation and transport in aqueous and biomolecular systems: insights from computer simulations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Exploring the proton pump mechanism of cytochrome c oxidase in real time

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Kinetic models of redox-coupled proton pumping

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Replacing Asn207 by aspartate at the neck of the D channel in the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides results in decoupling the proton pump

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Gating of proton and water transfer in the respiratory enzyme cytochrome c oxidase.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Redox-coupled proton translocation in biological systems: proton shuttling in cytochrome c oxidase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

Escaping free-energy minima

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

The role of the D- and K-pathways of proton transfer in the function of the haem-copper oxidases.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

The roles of the two proton input channels in cytochrome c oxidase from Rhodobacter sphaeroides probed by the effects of site-directed mutations on time-resolved electrogenic intraprotein proton transfer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941487

A mechanistic principle for proton pumping by cytochrome c oxidase

3 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Water-gated mechanism of proton translocation by cytochrome c oxidase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Microscopic pKa analysis of Glu286 in cytochrome c oxidase (Rhodobacter sphaeroides): toward a calibrated molecular model

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Functional hydration and conformational gating of proton uptake in cytochrome c oxidase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Role of subunit III and its lipids in the molecular mechanism of cytochrome c oxidase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Mechanism of Oxygen Reduction in Cytochrome c Oxidase and the Role of the Active Site Tyrosine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Bound water in the proton translocation mechanism of the haem-copper oxidases

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Dynamics of the glutamic acid 242 side chain in cytochrome c oxidase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1601982113

Deuterium isotope effect of proton pumping in cytochrome c oxidase

21 January 2018

1 reference

12 December 2020

Formation of the "peroxy" intermediate in cytochrome c oxidase is associated with internal proton/hydrogen transfer

1 reference

12 December 2020

Charge transfer in the K proton pathway linked to electron transfer to the catalytic site in cytochrome c oxidase

1 reference

12 December 2020

Molecular basis of proton uptake in single and double mutants of cytochrome c oxidase

1 reference

12 December 2020

Heme/Copper Terminal Oxidases

1 reference

12 December 2020

release_pqmjc4dk35emldb44zfqzpvney

Identifiers

DOI

10.1073/PNAS.1601982113

0 references

ADS bibcode

2016PNAS..113.7420L

0 references

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/pqmjc4dk35emldb44zfqzpvney

24 November 2022