(Q29036401)

27 March 2017

1 reference

3

Vasant Honavar

1 reference

27 March 2017

Drena Dobbs

2

0 references

Carson M Andorf

object named as

Carson Andorf

series ordinal

1

0 references

publication date

2007

1 reference

27 March 2017

1 reference

27 March 2017

volume

8

1 reference

27 March 2017

page(s)

284

1 reference

27 March 2017

issue

1

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2105-8-284

27 March 2017

exact match

0 references

cites work

GOPET: a tool for automated predictions of Gene Ontology terms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

The Gene Ontology (GO) project in 2006

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Probabilistic annotation of protein sequences based on functional classifications.

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Genome annotation errors in pathway databases due to semantic ambiguity in partial EC numbers

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

The Mouse Genome Database (MGD): from genes to mice--a community resource for mouse biology

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

The Universal Protein Resource (UniProt)

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

The mouse kinome: discovery and comparative genomics of all mouse protein kinases

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Retrieving sequences of enzymes experimentally characterized but erroneously annotated : the case of the putrescine carbamoyltransferase

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Gene ontology: tool for the unification of biology

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Cluster analysis and display of genome-wide expression patterns

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

A combined algorithm for genome-wide prediction of protein function

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Estimating the annotation error rate of curated GO database sequence annotations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Probabilistic protein function prediction from heterogeneous genome-wide data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Globally predicting protein functions based on co-expressed protein-protein interaction networks and ontology taxonomy similarities

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Machine learning in bioinformatics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Genome wide prediction of protein function via a generic knowledge discovery approach based on evidence integration.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Hierarchical multi-label prediction of gene function

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

A procedure for assessing GO annotation consistency

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Cytoplasmic protein tyrosine phosphatases, regulation and function: the roles of PTP1B and TC-PTP.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Protein serine/threonine phosphatases: life, death, and sleeping.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Gotrees: predicting go associations from protein domain composition using decision trees.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

GOChase: correcting errors from Gene Ontology-based annotations for gene products

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Whole-genome annotation by using evidence integration in functional-linkage networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Prediction of protein functional domains from sequences using artificial neural networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Predicting functions from protein sequences--where are the bottlenecks?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Protein annotation: detective work for function prediction.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994202

Percolation of annotation errors through hierarchically structured protein sequence databases

26 November 2018

1 reference

12 December 2020

Practical limits of function prediction

1 reference

12 December 2020

Modeling the percolation of annotation errors in a database of protein sequences

1 reference

12 December 2020

Remote homology detection: a motif based approach

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-8-284

1 reference

journals/bmcbi/AndorfDH07

27 March 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1032322203

0 references

Fatcat ID

release_ipb2fkdzxjfqfjqqdpdr3xcajy

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ipb2fkdzxjfqfjqqdpdr3xcajy

24 November 2022