(Q30066419)

1

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Mark J. Koenigsknecht

2

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Paul E. Carlson

3

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Gabrielle E. Hatton

4

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Adam M. Nelson

5

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Bo Li

6

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Jun Z. Li

8

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Vincent B. Young

Organization of GC/MS and LC/MS metabolomics data into chemical libraries

9

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language of work or name

English

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publication date

20 January 2014

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published in

Nature Communications

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volume

5

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Disruption of the human gut microbiota following Norovirus infection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Antibiotics in early life alter the murine colonic microbiome and adiposity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

ACE2 links amino acid malnutrition to microbial ecology and intestinal inflammation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Burden of Clostridium difficile on the healthcare system

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Bacteria, colonic fermentation, and gastrointestinal health

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Cefoperazone-treated mice as an experimental platform to assess differential virulence of Clostridium difficile strains

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

The interplay between microbiome dynamics and pathogen dynamics in a murine model of Clostridium difficile Infection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Clospore: a liquid medium for producing high titers of semi-purified spores of Clostridium difficile.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Enterotypes of the human gut microbiome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Profiling the effects of isocitrate dehydrogenase 1 and 2 mutations on the cellular metabolome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Effect of antibiotic treatment on the intestinal metabolome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Amino acid metabolism in intestinal bacteria: links between gut ecology and host health

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Mechanisms controlling pathogen colonization of the gut.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Systemic gut microbial modulation of bile acid metabolism in host tissue compartments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

A human gut microbial gene catalogue established by metagenomic sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Metabolism of bile salts in mice influences spore germination in Clostridium difficile

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Integrated, nontargeted ultrahigh performance liquid chromatography/electrospray ionization tandem mass spectrometry platform for the identification and relative quantification of the small-molecule complement of biological systems

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Reproducible community dynamics of the gastrointestinal microbiota following antibiotic perturbation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Bile salts and glycine as cogerminants for Clostridium difficile spores

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Metagenomic analysis of the human distal gut microbiome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Emergence of fluoroquinolones as the predominant risk factor for Clostridium difficile-associated diarrhea: a cohort study during an epidemic in Quebec

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Flexible community structure correlates with stable community function in methanogenic bioreactor communities perturbed by glucose

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Antibiotics and Clostridium difficile

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Cluster analysis and display of genome-wide expression patterns

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Regulated transcription of Clostridium difficile toxin genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Influence of dietary protein supplements on the formation of bacterial metabolites in the colon

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

3 June 2018

Colonization resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Colonization resistance of the digestive tract in conventional and antibiotic-treated mice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressureized atmosphere.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

INTESTINAL FLORA IN NEW-BORN INFANTS

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS4114

Shotgun metaproteomics of the human distal gut microbiota

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS4114

Quantification of monosaccharides through multiple-reaction monitoring liquid chromatography/mass spectrometry using an aminopropyl column

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS4114

Quantification of human cells in NOD/SCID mice by duplex real-time polymerase-chain reaction.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950275

Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24445449

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A defined growth medium for Clostridium difficile

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24445449

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Protein degradation by human intestinal bacteria

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24445449

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS4114

1 reference

Dimensions Publication ID

ADS bibcode

2014NatCo...5.3114T

0 references

1016475104

0 references

1 reference

1 reference

PubMed publication ID

24445449

1 reference