(Q30140976)

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The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications

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scholarly article

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26609323%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications (English)

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Europe PubMed Central

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1 March 2020

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1 March 2020

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1 March 2020

author name string

Nele Horemans

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1 March 2020

Pieter Monsieurs

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1 March 2020

Hildegarde Vandenhove

5

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1 March 2020

Ronny Blust

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1 March 2020

publication date

25 November 2015

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1 March 2020

Biotechnology for Biofuels

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1 March 2020

8

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1 March 2020

188

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1 March 2020

https://scigraph.springernature.com/pub.10.1186/s13068-015-0381-1

0 references

Characterizing dose response relationships: Chronic gamma radiation in Lemna minor induces oxidative stress and altered polyploidy level.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

The map-based genome sequence of Spirodela polyrhiza aligned with its chromosomes, a reference for karyotype evolution.

1 reference

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3 June 2018

β-Radiation Stress Responses on Growth and Antioxidative Defense System in Plants: A Study with Strontium-90 in Lemna minor

1 reference

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3 June 2018

In response: ecotoxicogenomics addressing future needs: an industry perspective

1 reference

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3 June 2018

UniProt: a hub for protein information

1 reference

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3 June 2018

Efficient transformation and artificial miRNA gene silencing in Lemna minor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Growing duckweed for biofuel production: a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

A marriage of convenience; a simple food chain comprised of Lemna minor (L.) and Gammarus pulex (L.) to study the dietary transfer of zinc.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

InterProScan 5: genome-scale protein function classification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

The MaSuRCA genome assembler

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Genome sequence of the date palm Phoenix dactylifera L

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

1 reference

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3 June 2018

Advances in plant genome sequencing

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3 June 2018

The draft genome and transcriptome of Cannabis sativa

1 reference

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3 June 2018

High-throughput sequencing of three Lemnoideae (duckweeds) chloroplast genomes from total DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Scaffolding pre-assembled contigs using SSPACE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

DNA barcoding of the Lemnaceae, a family of aquatic monocots

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

The Pfam protein families database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Blast2GO: A comprehensive suite for functional analysis in plant genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Complete sequence of the duckweed (Lemna minor) chloroplast genome: structural organization and phylogenetic relationships to other angiosperms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

1 reference

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3 June 2018

KAAS: an automatic genome annotation and pathway reconstruction server

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Identification of six differentially expressed genes in response to copper exposure in the aquatic plant Lemna gibba (Duckweed).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

1 reference

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3 June 2018

Gene finding in novel genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Gene prediction with a hidden Markov model and a new intron submodel

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

BLAT—The BLAST-Like Alignment Tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Heterozygosity, heteromorphy, and phylogenetic trees in asexual eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Biosynthesis of the chloroplast cytochrome b6f complex: studies in a photosynthetic mutant of Lemna

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659200

3 June 2018

Genetic structure of the genus Lemna L. (Lemnaceae) as revealed by amplified fragment length polymorphism.

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Pilot-scale comparison of four duckweed strains from different genera for potential application in nutrient recovery from wastewater and valuable biomass production

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Effects of high ammonium level on biomass accumulation of common duckweed Lemna minor L.

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

After the genome sequencing of duckweed - how to proceed with research on the fastest growing angiosperm?

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Growth rate based dose-response relationships and EC-values of ten heavy metals using the duckweed growth inhibition test (ISO 20079) with Lemna minor L. clone St.

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

A protocol for conducting 7-day daily renewal tests with Lemna gibba.

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Alumina nanoparticles enhance growth of Lemna minor.

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Informed and automated k-mer size selection for genome assembly

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

The First 50 Plant Genomes

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Chromatin organisation in duckweed interphase nuclei in relation to the nuclear DNA content.

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Duckweed in bloom: the 2nd International Conference on Duckweed Research and Applications heralds the return of a plant model for plant biology

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Cutadapt removes adapter sequences from high-throughput sequencing reads

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Telling Duckweed Apart: Genotyping Technologies for the Lemnaceae

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

In vitro selection of duckweed geographical isolates for potential use in swine lagoon effluent renovation

1 reference

https://api.crossref.org/works/10.1186%2FS13068-015-0381-1

21 January 2018

Duckweeds (Lemnaceae family): a potential source of protein and amino acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/26609323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Duckweed Lemna minor as a tool for testing toxicity and genotoxicity of surface waters

1 reference

https://pubmed.ncbi.nlm.nih.gov/26609323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Uranium and cadmium provoke different oxidative stress responses in Lemna minor L

1 reference

https://pubmed.ncbi.nlm.nih.gov/26609323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/S13068-015-0381-1

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Europe PubMed Central

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1 March 2020

Dimensions Publication ID

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1 March 2020

1 reference

Europe PubMed Central

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1 March 2020

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