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The PredictProtein server.
scientific article
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Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
title
The PredictProtein server.
(English)
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
author
Jinfeng Liu
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
Burkhard Rost
series ordinal
1
object named as
Burkhard Rost
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
language of work or name
English
0 references
publication date
1 July 2003
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
volume
31
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
page(s)
3300-3304
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
issue
13
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
cites work
NORSp: Predictions of long regions without regular secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
EVA: Evaluation of protein structure prediction servers.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Domains, motifs and clusters in the protein universe
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
NLSdb: database of nuclear localization signals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Sequence conserved for subcellular localization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Transmembrane helix predictions revisited
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Enzyme function less conserved than anticipated.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Review: protein secondary structure prediction continues to rise.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Intrinsic errors in genome annotation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Finding nuclear localization signals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
The Protein Data Bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Protein secondary structure prediction based on position-specific scoring matrices
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Predicting allosteric switches in myosins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Predicting conformational switches in proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
ESPript: analysis of multiple sequence alignments in PostScript
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Twilight zone of protein sequence alignments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Recent improvements of the ProDom database of protein domain families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
SMART: identification and annotation of domains from signalling and extracellular protein sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
The PROSITE database, its status in 1999
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
MView: a web-compatible database search or multiple alignment viewer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Protein fold recognition by prediction-based threading
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Topology prediction for helical transmembrane proteins at 86% accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Pitfalls of protein sequence analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Analysis of compositionally biased regions in sequence databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
PHD: predicting one-dimensional protein structure by profile-based neural networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Prediction and analysis of coiled-coil structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Local alignment statistics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Prediction of protein secondary structure at better than 70% accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Sequence analysis by electronic mail server
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Combining evolutionary information and neural networks to predict protein secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Conservation and prediction of solvent accessibility in protein families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Transmembrane helices predicted at 95% accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Predicting coiled coils from protein sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Database of homology-derived protein structures and the structural meaning of sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
3 June 2018
Jury returns on structure prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
20 June 2018
Loopy proteins appear conserved in evolution.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
26 November 2018
Role of evolutionary information in predicting the disulfide-bonding state of cysteine in proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168915
retrieved
26 November 2018
Alignments grow, secondary structure prediction improves
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12824312
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKG508
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
DBLP publication ID
journals/nar/RostL03
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
168915
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
PubMed ID
12824312
1 reference
stated in
Europe PubMed Central
PMCID
168915
retrieved
14 September 2017
ResearchGate publication ID
6909334
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