(Q30354287)

20 June 2017

title

Site-specific structural constraints on protein sequence evolutionary divergence: local packing density versus solvent exposure. (English)

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20 June 2017

So-Wei Yeh

1

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Sung-Huan Yu

object named as

Sung-Huan Yu

3

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Julian Echave

object named as

Julian Echave

6

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author name string

Jen-Wei Liu

2

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20 June 2017

Chien-Hua Shih

4

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20 June 2017

Jenn-Kang Hwang

5

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20 June 2017

publication date

8 October 2013

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Molecular Biology and Evolution

20 June 2017

published in

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20 June 2017

volume

31

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20 June 2017

issue

1

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20 June 2017

page(s)

135-139

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ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

20 June 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

The pattern of amino acid replacements in alpha/beta-barrels

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Biophysical and structural considerations for protein sequence evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Flexibility and packing in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Protein sequence entropy is closely related to packing density and hydrophobicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

The interface of protein structure, protein biophysics, and molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Deriving protein dynamical properties from weighted protein contact number.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Sequence evolution correlates with structural dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Comparison of site-specific rate-inference methods for protein sequences: empirical Bayesian methods are superior

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Interior and surface of monomeric proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

An integrated view of protein evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

AL2CO: calculation of positional conservation in a protein sequence alignment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

The relationship between relative solvent accessibility and evolutionary rate in protein evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Evolutionary information hidden in a single protein structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Protein evolution constraints and model-based techniques to study them

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

Signatures of protein biophysics in coding sequence evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMST178

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MST178

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20 June 2017

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