(Q30378910)

English

A refinement protocol to determine structure, topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints.

scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

A refinement protocol to determine structure, topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints. (English)

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

membrane protein

1 reference

based on heuristic

inferred from title

Gianluigi Veglia

6

object named as

Gianluigi Veglia

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

author name string

Lei Shi

1

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

Nathaniel J Traaseth

2

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

Raffaello Verardi

3

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

Alessandro Cembran

4

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

Jiali Gao

5

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

14 July 2009

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

Journal of Biomolecular NMR

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

44

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

4

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

195-205

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

https://scigraph.springernature.com/pub.10.1007/s10858-009-9328-9

0 references

Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach

1 reference

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20 June 2018

Structure and Molecular Mechanism of a Nucleobase-Cation-Symport-1 Family Transporter

1 reference

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20 June 2018

NMR solution structure of the integral membrane enzyme DsbB: functional insights into DsbB-catalyzed disulfide bond formation

1 reference

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A structural mechanism for MscS gating in lipid bilayers

1 reference

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The Structure of an Open Form of an E. coli Mechanosensitive Channel at 3.45 A Resolution

1 reference

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United we stand: combining structural methods

1 reference

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Protein-protein interactions in the membrane: sequence, structural, and biological motifs

1 reference

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20 June 2018

Orientation of the Escherichia coli outer membrane protein OmpX in phospholipid bilayer membranes determined by solid-State NMR.

1 reference

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20 June 2018

Transmembrane helix uniformity examined by spectral mapping of torsion angles.

1 reference

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20 June 2018

Solution NMR Structure of a Designed Metalloprotein and Complementary Molecular Dynamics Refinement

1 reference

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20 June 2018

Asymmetric methyl group labeling as a probe of membrane protein homo-oligomers by NMR spectroscopy

1 reference

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Structural basis for the function and inhibition of an influenza virus proton channel

1 reference

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20 June 2018

Lipid bilayers: an essential environment for the understanding of membrane proteins.

1 reference

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20 June 2018

Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase

1 reference

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Combined NMR and EPR spectroscopy to determine structures of viral fusion domains in membranes

1 reference

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20 June 2018

Solution NMR of membrane proteins in bilayer mimics: small is beautiful, but sometimes bigger is better

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

20 June 2018

Nuclear magnetic resonance structural studies of membrane proteins in micelles and bilayers.

1 reference

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Small multidrug resistance proteins: a multidrug transporter family that continues to grow.

1 reference

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Structural Similarity of a Membrane Protein in Micelles and Membranes

1 reference

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Solid-state NMR reveals structural and dynamical properties of a membrane-anchored electron-carrier protein, cytochrome b5.

1 reference

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Backbone Structure of the Amantadine-Blocked Trans-Membrane Domain M2 Proton Channel from Influenza A Virus

1 reference

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Isotropic bicelles stabilize the functional form of a small multidrug-resistance pump for NMR structural studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

20 June 2018

Oligomeric structure, dynamics, and orientation of membrane proteins from solid-state NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

20 June 2018

Membrane-protein topology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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Structure determination of a membrane protein with two trans-membrane helices in aligned phospholipid bicelles by solid-state NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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High-resolution NMR spectroscopy of a GPCR in aligned bicelles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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Folding and stability of alpha-helical integral membrane proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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Mapping the interaction surface of a membrane protein: unveiling the conformational switch of phospholamban in calcium pump regulation.

1 reference

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(1)H/(15)N heteronuclear NMR spectroscopy shows four dynamic domains for phospholamban reconstituted in dodecylphosphocholine micelles.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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Structure of (KIAGKIA)3 aggregates in phospholipid bilayers by solid-state NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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NMR solution structure and topological orientation of monomeric phospholamban in dodecylphosphocholine micelles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824793

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Solid-State NMR Investigation of the Depth of Insertion of Protegrin-1 in Lipid Bilayers Using Paramagnetic Mn2+

1 reference

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HADDOCK: a protein-protein docking approach based on biochemical or biophysical information

1 reference

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The Xplor-NIH NMR molecular structure determination package

1 reference

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Refinement of protein structures in explicit solvent

1 reference

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Using pisa pies to resolve ambiguities in angular constraints from PISEMA spectra of aligned proteins.

1 reference

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Comparison of protein solution structures refined by molecular dynamics simulation in vacuum, with a generalized Born model, and with explicit water

1 reference

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An innovative procedure using a sublimable solid to align lipid bilayers for solid-state NMR studies

1 reference

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Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel.

1 reference

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1 reference

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Protein backbone angle restraints from searching a database for chemical shift and sequence homology

1 reference

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High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints

1 reference

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1 reference

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Macromolecular structural elucidation with solid-state NMR-derived orientational constraints

1 reference

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1 reference

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Determination of three-dimensional structures of proteins by simulated annealing with interproton distance restraints. Application to crambin, potato carboxypeptidase inhibitor and barley serine proteinase inhibitor 2.

1 reference

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1 reference

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Application of solid-state NMR restraint potentials in membrane protein modeling

1 reference

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Ez, a Depth-dependent Potential for Assessing the Energies of Insertion of Amino Acid Side-chains into Membranes: Derivation and Applications to Determining the Orientation of Transmembrane and Interfacial Helices

1 reference

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Structural dynamics and topology of phospholamban in oriented lipid bilayers using multidimensional solid-state NMR

1 reference

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Membrane-bound dimer structure of a beta-hairpin antimicrobial peptide from rotational-echo double-resonance solid-state NMR

1 reference

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1 reference

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Intensity and mosaic spread analysis from PISEMA tensors in solid-state NMR.

1 reference

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1 reference

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1 reference

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26 November 2018

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1 reference

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Complete cross-validation and R-factor calculation of a solid-state NMR derived structure.

1 reference

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1 reference

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1 reference

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Two-dimensional solid-state NMR reveals two topologies of sarcolipin in oriented lipid bilayers

1 reference

https://pubmed.ncbi.nlm.nih.gov/19597943

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure determination of membrane proteins by NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/19597943

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Combining experimental information from crystal and solution studies: joint X-ray and NMR refinement

1 reference

https://pubmed.ncbi.nlm.nih.gov/19597943

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/19597943

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solid-state NMR and rigid body molecular dynamics to determine domain orientations of monomeric phospholamban

1 reference

https://pubmed.ncbi.nlm.nih.gov/19597943

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S10858-009-9328-9

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

11 November 2017

ResearchGate publication ID

0 references

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